BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0001.4438.p (768 letters) Database: BlastDatabases/707/707 3697 sequences; 1,221,021 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gi|152980552|ref|YP_001352440.1| 5-methyltetrahydropteroyltriglu... 1264 0.0 gi|152979844|ref|YP_001353012.1| 5-methyltetrahydropteroyltriglu... 864 0.0 >gi|152980552|ref|YP_001352440.1| 5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase [Janthinobacterium sp. Marseille] Length = 763 Score = 1264 bits (3271), Expect = 0.0, Method: Compositional matrix adjust. Identities = 601/760 (79%), Positives = 672/760 (88%), Gaps = 2/760 (0%) Query: 1 MTTIHNLGFPRIGARRELKFALESYWKGESSLAALEETGAQLRRRHWQDQAALDLVPVGD 60 MTTIHNLGFPRIGA+RELKFALESYWKGES+ AL++ GAQLR+RHW +QA LD VPVGD Sbjct: 1 MTTIHNLGFPRIGAKRELKFALESYWKGESTRDALKDLGAQLRKRHWDNQAGLDFVPVGD 60 Query: 61 FSFYDQVLDMSVTLGNLPARVQDFHGHALDNYFRVARGRSAPHA--HDSCCAGVAAGEMT 118 F+FYDQ+LDMS TLGNLP RV+ FHG LDNYFRVARGRSA A H +CC GVAAGEMT Sbjct: 61 FAFYDQMLDMSFTLGNLPERVRGFHGDPLDNYFRVARGRSAQGAEEHGTCCGGVAAGEMT 120 Query: 119 KWFDTNYHYIVPEFHATTRFTLDASRLLAQVRQAQEQGVQAKPVIIGPVTYLALGKAKDG 178 KWFDTNYHYIVPEF A T F LD +RLL Q+ +A+ QGV+AKPVIIGP+TYLA GKAKD Sbjct: 121 KWFDTNYHYIVPEFTAATEFKLDTTRLLEQLAEAKAQGVKAKPVIIGPITYLAQGKAKDD 180 Query: 179 SDKLALLERLLPVYSQLLDTLAAAGVQWVQIDEPILVTELDADWQHALNHAYHHLKVCKV 238 KLALL RLLPVY+QLLD LAA GV+WVQIDEPILVTELD DWQ+A AY LK +V Sbjct: 181 LYKLALLPRLLPVYAQLLDALAAQGVEWVQIDEPILVTELDTDWQNAFKSAYEQLKTSRV 240 Query: 239 KLLLATYFGQLQENGYLAANLPVAGLHVDAIQGREEVTGLLNILPPHKVLSLGVINGRNI 298 K+LLATYFGQL EN LAA LPVAGLH+DAI GR++V L+++L KVLSLGVINGRNI Sbjct: 241 KVLLATYFGQLLENRELAAKLPVAGLHIDAINGRDDVLPLIDLLSADKVLSLGVINGRNI 300 Query: 299 WKTDLSALLDWLEPLAQRLGERLWIAPSCSLLHVPVDLAQEEKLDQDIQSWLAFAVQKLD 358 WKTDL+A+LDW+EPLA+RLGERLW+APSCSLLHVPVDL E+KLD +I+SWLA+A+QKLD Sbjct: 301 WKTDLTAVLDWIEPLAKRLGERLWVAPSCSLLHVPVDLNSEQKLDAEIKSWLAYAIQKLD 360 Query: 359 ELQLIGRALREGRAAVQDALHANAAALAARRTSPRVHNPAVRAALAQLTPQHGQRNSHYP 418 EL+++G+ALR GR AV+ L N AAL ARR SPRV+NPAV+AA+A++ G+R++ Y Sbjct: 361 ELRVLGKALRSGRDAVKAELAENKAALTARRASPRVNNPAVQAAIAKIDAGLGKRDNTYA 420 Query: 419 ERASKQAALLQLPLYPTTTIGSFPQTAEIRQARSHYKAGQLDEAAYRTVMRAEIERSVRE 478 RA KQAALL+LP YPTTTIGSFPQTAEIR ARS +KAG+LD A+Y+T M+AEIERSVRE Sbjct: 421 LRAKKQAALLKLPAYPTTTIGSFPQTAEIRHARSEFKAGRLDNASYKTAMQAEIERSVRE 480 Query: 479 QEALGLDVLVHGEAERNDMVEYFGEQLQGYAFSQFGWVQSYGSRCVKPPILFGDISRPQA 538 QE LGLDVLVHGEAERNDMVEYFGEQLQGYAFSQFGWVQSYGSRCVKPPILFGDISRPQA Sbjct: 481 QETLGLDVLVHGEAERNDMVEYFGEQLQGYAFSQFGWVQSYGSRCVKPPILFGDISRPQA 540 Query: 539 MTVEWITHAQSLTSKPMKGMLTGPVTLLNWSFVRDDQPRADSCRQLALAIRQEVLDLEAA 598 MTVEW T+AQSLT KPMKGMLTGPVT+LNWSFVRDDQPR+ SC+QLALAIR+EVLDLE A Sbjct: 541 MTVEWSTYAQSLTEKPMKGMLTGPVTMLNWSFVRDDQPRSVSCKQLALAIREEVLDLEKA 600 Query: 599 GVRVIQIDEAALREGLPLRRAQWQHYLNWAVQAFRITANGVADTTQIHTHMCYSEFNDII 658 GV VIQIDEAALREGLPLR++QWQ YL+WAV++FRITANGV D TQIHTHMCYSEFNDII Sbjct: 601 GVHVIQIDEAALREGLPLRKSQWQEYLDWAVESFRITANGVEDETQIHTHMCYSEFNDII 660 Query: 659 ASIADMDADVITIETSRSDMELLDAFDHFNYPNEIGPGVYDIHSPNIPTQEHMVQLMQKA 718 ASIADMDADVITIETSRSDMELLDAFD+FNYPNEIGPGVYDIHSPNIPTQEHMVQLM+KA Sbjct: 661 ASIADMDADVITIETSRSDMELLDAFDNFNYPNEIGPGVYDIHSPNIPTQEHMVQLMKKA 720 Query: 719 TERIDARRLWVNPDCGLKTRQWAEVIPALRNMVAAAQTLR 758 ER+ A RLWVNPDCGLKTRQWAEV+PAL NMVAAA+TLR Sbjct: 721 AERVPAERLWVNPDCGLKTRQWAEVLPALNNMVAAAKTLR 760 >gi|152979844|ref|YP_001353012.1| 5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase [Janthinobacterium sp. Marseille] Length = 762 Score = 864 bits (2232), Expect = 0.0, Method: Compositional matrix adjust. Identities = 445/772 (57%), Positives = 544/772 (70%), Gaps = 14/772 (1%) Query: 1 MTTIHNLGFPRIGARRELKFALESYWKGESSLAALEETGAQLRRRHW--QDQAALDLVPV 58 M H LGFPRIGA+RELKFA+ES+W+G++ LAAL+ETG LR+RHW Q +A LD V V Sbjct: 1 MAKAHILGFPRIGAQRELKFAVESFWRGDTGLAALQETGKTLRQRHWAIQAEAGLDYVSV 60 Query: 59 GDFSFYDQVLDMSVTLGNLPARVQ-DFHGHALDNYFRVARGRSAPHAHDSCCAGVAAGEM 117 GDF++YDQVL+ LG +P R + D L +YF +ARG +A H A EM Sbjct: 61 GDFAWYDQVLNTLALLGAVPTRFKFDPEKLTLADYFTLARG-NAEHF---------AMEM 110 Query: 118 TKWFDTNYHYIVPEFHATTRFTLDASRLLAQVRQAQEQGVQAKPVIIGPVTYLALGKAKD 177 TKWFDTNYHY+VPEF A F L + +A G K ++GP++ L LGK K Sbjct: 111 TKWFDTNYHYLVPEFTADISFDGGVDWLFEENAEAVALGHATKVTLVGPLSLLYLGKIKS 170 Query: 178 G-SDKLALLERLLPVYSQLLDTLAAAGVQWVQIDEPILVTELDADWQHALNHAYHHLKVC 236 G ++KLALL +++ Y ++L L AGV+WVQIDEPIL ELDA W+ A Y L V Sbjct: 171 GIANKLALLPKVIAGYQKVLQRLQDAGVEWVQIDEPILALELDAAWRAAFEPTYQALSVG 230 Query: 237 KVKLLLATYFGQLQENGYLAANLPVAGLHVDAIQGREEVTGLLNILPPHKVLSLGVINGR 296 KLLLATYF Q++E+ L +LPVAG+H+D ++G ++ L P +VLS GV++GR Sbjct: 231 APKLLLATYFDQVREHSALLRSLPVAGVHLDLVRGAGQLPEFLQDWPQERVLSAGVVDGR 290 Query: 297 NIWKTDLSALLDWLEPLAQRLGERLWIAPSCSLLHVPVDLAQEEKLDQDIQSWLAFAVQK 356 NIW+ DL + L L+PL LGERLW++ SCSLLHVPVDLA E KLD +I+ WLAFA QK Sbjct: 291 NIWRADLDSALALLQPLQASLGERLWVSASCSLLHVPVDLAHENKLDAEIKGWLAFATQK 350 Query: 357 LDELQLIGRALREGRAAVQDALHANAAALAARRTSPRVHNPAVRAALAQLTPQHGQRNSH 416 + E+ + RAL AV+ A A A+AAR+ SPR+HNP V+ L Q+ RN+ Sbjct: 351 VVEITTLKRALSGEAKAVEAQFTAAALAVAARKVSPRIHNPLVQKRLRQIDQIPATRNNV 410 Query: 417 YPERASKQAALLQLPLYPTTTIGSFPQTAEIRQARSHYKAGQLDEAAYRTVMRAEIERSV 476 + ER KQ A +LP +PTT IGSFPQTA+IRQ R+ YK G++ Y MR E+ V Sbjct: 411 FAERIVKQQARFKLPAFPTTNIGSFPQTADIRQTRAQYKRGEIGHLDYLNRMREEVRLVV 470 Query: 477 REQEALGLDVLVHGEAERNDMVEYFGEQLQGYAFSQFGWVQSYGSRCVKPPILFGDISRP 536 ++QE +GLDVLVHGE ERNDMVEYFGEQL GYAF+ GWVQSYGSRCVKPP ++GD+ RP Sbjct: 471 QKQEEIGLDVLVHGEPERNDMVEYFGEQLWGYAFTANGWVQSYGSRCVKPPFIYGDVYRP 530 Query: 537 QAMTVEWITHAQSLTSKPMKGMLTGPVTLLNWSFVRDDQPRADSCRQLALAIRQEVLDLE 596 +AMTV W AQSLTSKPMKGMLTGPVT+L WSFVRDDQPR + Q+ALA+R EV+DLE Sbjct: 531 EAMTVGWSEFAQSLTSKPMKGMLTGPVTMLQWSFVRDDQPRDQTALQIALALRDEVVDLE 590 Query: 597 AAGVRVIQIDEAALREGLPLRRAQWQHYLNWAVQAFRITANGVADTTQIHTHMCYSEFND 656 AG+ +IQIDE A REGLPL+ W HYL+WAV+AFRI+A GV D TQIHTHMCYSEFND Sbjct: 591 KAGIGMIQIDEPAFREGLPLKAVDWPHYLDWAVKAFRISACGVQDDTQIHTHMCYSEFND 650 Query: 657 IIASIADMDADVITIETSRSDMELLDAFDHFNYPNEIGPGVYDIHSPNIPTQEHMVQLMQ 716 I+ IA MDADVITIETSRSDMELLD F F YPN+IGPGVYDIHSP +P E M +L++ Sbjct: 651 ILPWIAAMDADVITIETSRSDMELLDGFGEFAYPNDIGPGVYDIHSPRVPKVEEMQRLLR 710 Query: 717 KATERIDARRLWVNPDCGLKTRQWAEVIPALRNMVAAAQTLRAAHHELAQAA 768 KA I +RLWVNPDCGLKTR W E AL NMV AA+TLR + QAA Sbjct: 711 KARGVIPDQRLWVNPDCGLKTRGWPETTTALENMVLAARTLREEVAQQEQAA 762 Database: BlastDatabases/707/707 Posted date: Apr 13, 2011 12:58 PM Number of letters in database: 1,221,021 Number of sequences in database: 3697 Lambda K H 0.321 0.134 0.405 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 3697 Number of Hits to DB: 1,750,423 Number of extensions: 70643 Number of successful extensions: 220 Number of sequences better than 1.0e-08: 2 Number of HSP's gapped: 210 Number of HSP's successfully gapped: 2 Length of query: 768 Length of database: 1,221,021 Length adjustment: 91 Effective length of query: 677 Effective length of database: 884,594 Effective search space: 598870138 Effective search space used: 598870138 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.9 bits) S2: 133 (55.8 bits)