BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0001.4433.p (344 letters) Database: BlastDatabases/707/707 3697 sequences; 1,221,021 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gi|152981244|ref|YP_001351942.1| hypothetical protein mma_0252 [... 174 6e-45 gi|152981199|ref|YP_001351939.1| hypothetical protein mma_0249 [... 162 2e-41 gi|152982773|ref|YP_001352426.1| aldo/keto reductase family oxid... 110 1e-25 gi|152981140|ref|YP_001355236.1| aldo/keto reductase family oxid... 87 1e-18 >gi|152981244|ref|YP_001351942.1| hypothetical protein mma_0252 [Janthinobacterium sp. Marseille] Length = 337 Score = 174 bits (441), Expect = 6e-45, Method: Compositional matrix adjust. Identities = 121/320 (37%), Positives = 174/320 (54%), Gaps = 17/320 (5%) Query: 14 MSYRRTGRSGLLLPAISLGLWQNFGGVDNFETGRAILRRAFDRGVTHFDLANNYGPPAGS 73 M Y G+SGL + + LG FGG + +T I++ A + G+ D A+ Y G Sbjct: 1 MQYENLGKSGLKVSRLCLGTMM-FGGASDEQTSHQIIQHAHEHGINFIDTADIY--TGGE 57 Query: 74 AEDNFGRWMAKDFLPYRDELVISSKAG--WQMWPGPYGGPSGARKHLIASCEQSLKRMGL 131 +E G+ +A RD+ V+++K G WP G +R+ +I + EQSL+R+G Sbjct: 58 SERVVGKGIAAQ----RDKWVLATKVGNGSDKWPNEKGL---SRRRIIQAVEQSLQRLGT 110 Query: 132 DYVDIFYSHRVDPDTPLEETMGALAHLHRQGKALYVGISSYSPELTRQAAAILKSEGV-P 190 DY+DI+Y HR DP TPL ET+ AL L QGK Y G+S++S + + K GV P Sbjct: 111 DYIDIYYLHRPDPATPLHETVRALGDLIAQGKIRYFGLSNFSAWQLAEVVHLSKELGVAP 170 Query: 191 LLIHQPNYSMLNRAIEGGLLPALEELGVGCIGFSPLAQGLLTSKYL-GGVP-EGARVTRA 248 ++ QP Y+ NR E LPA G+G + +SPLA+G+LT KYL G P + +RV R Sbjct: 171 PIVSQPYYNAANRMPEVEHLPACHFHGLGVVSYSPLARGVLTGKYLPGNEPDQNSRVGRG 230 Query: 249 PSLP-QRMLSEENLARIRALNEIAQQRGQTLAQMAIAWVLRDARVTSALIGARTVEQLDD 307 Q E++A +AL E AQ G T ++A+AWVL + VTS + G RT EQ Sbjct: 231 DKRALQTEWRPESIALAQALQEHAQVHGTTNIELALAWVLNNRLVTSVIGGPRTFEQWQA 290 Query: 308 ALDALKKPDFSADELARIDR 327 L+ L F+ ++ A DR Sbjct: 291 YLNGLNY-HFTPEDEALFDR 309 >gi|152981199|ref|YP_001351939.1| hypothetical protein mma_0249 [Janthinobacterium sp. Marseille] Length = 337 Score = 162 bits (411), Expect = 2e-41, Method: Compositional matrix adjust. Identities = 106/318 (33%), Positives = 171/318 (53%), Gaps = 9/318 (2%) Query: 12 GRMSYRRTGRSGLLLPAISLGLWQNFGGVDNFETGRAILRRAFDRGVTHFDLANNYGPPA 71 G YR GR+G+ + ++LG FG + I+ RA D G+ D AN Y Sbjct: 2 GLKDYRNFGRTGVKISPLTLGCMM-FGNKTELDDTVRIIDRAIDAGINIIDTANVYA--R 58 Query: 72 GSAEDNFGRWMAKDFLPYRDELVISSKAGWQMWPGPYGGPSGARKHLIASCEQSLKRMGL 131 G +E+ G + ++ R ++ ++SK M +R+H+I E SL+R+ Sbjct: 59 GRSEEFTGEALKRN--GKRKDIFLASKVHLPMHDTDGNLRGSSRRHIIQQVEDSLRRLQT 116 Query: 132 DYVDIFYSHRVDPDTPLEETMGALAHLHRQGKALYVGISSYSPELTRQAAAILKSEGVPL 191 DY+D++ HR +P T ++ET+ AL L + GK Y+G ++++ +A K G+ Sbjct: 117 DYLDLYQIHRPEPTTAIDETLRALDDLVKSGKVRYIGSTTFAGWQVVEALWASKELGLNR 176 Query: 192 LI-HQPNYSMLNRAIEGGLLPALEELGVGCIGFSPLAQGLLTSKYLGG--VPEGARVTRA 248 + QP Y++L+R IE LLP E G+ I +SP+ GLL+ KY G +P +R T Sbjct: 177 FVSEQPPYNLLDRRIERELLPVAETFGLAVIPWSPIGGGLLSGKYRKGQPLPLDSRYTNP 236 Query: 249 PSLPQRMLSEENLARIRALNEIAQQRGQTLAQMAIAWVLRDARVTSALIGARTVEQLDDA 308 + R + I L+E+A ++G L+Q+A+AWV + VTSA+ G RT+EQL+DA Sbjct: 237 NPMQARRFVDRVFDVIEPLSELAAEKGVPLSQLALAWVAQQRGVTSAITGPRTLEQLEDA 296 Query: 309 LDALKKPDFSADELARID 326 L A++ + ++L RID Sbjct: 297 LQAIEV-KLTPEDLQRID 313 >gi|152982773|ref|YP_001352426.1| aldo/keto reductase family oxidoreductase TAS [Janthinobacterium sp. Marseille] Length = 349 Score = 110 bits (274), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 98/335 (29%), Positives = 154/335 (45%), Gaps = 44/335 (13%) Query: 14 MSYRRTGRSGLLLPAISLGLWQNFGGVDNFETGRAILRRAFDRGVTHFDLANNYGPP--- 70 M Y++ G++ + + I+LG +G + A L A GV D A Y P Sbjct: 1 MKYQQLGKTDIKVSNIALGT-MTWGEQNTEAEAHAQLDMAIAAGVNLIDAAEMYPVPPKP 59 Query: 71 --AGSAEDNFGRWMAKDFLPYRDELVISSKAGWQMWPGP-----------YGGPSGARKH 117 G E G W+ K RD+L+I++KA GP +G S R Sbjct: 60 ETQGLTERYLGTWLKKS--GKRDQLIIATKAA-----GPARLPHQPQHVRHGKTSFDRAS 112 Query: 118 LIASCEQSLKRMGLDYVDIF----------------YSHRVDPDT-PLEETMGALAHLHR 160 L + +L+R+ DY+D++ Y+H D DT P+ ET+ LA + Sbjct: 113 LTDALHGNLERLQTDYIDLYQLHWPDRSVNIFGRQNYTHFPDEDTVPIAETLSVLADFVK 172 Query: 161 QGKALYVGISSYSPELTRQAAAILKSEGVPLLIHQPN-YSMLNRAIEGGLLPALEELGVG 219 QGK Y+G+S+ +P Q + +P ++ N YS++NR E L + +G Sbjct: 173 QGKIRYIGVSNETPWGLAQFLRASEQLNLPRIVSIQNPYSLVNRYFEIALSEFSHQEQIG 232 Query: 220 CIGFSPLAQGLLTSKYLGGV-PEGARVTRAPSLPQRMLSEENLARIRALNEIAQQRGQTL 278 + +SPLA G+L+ KYL G P R+T + + A + A +A++ G Sbjct: 233 LLAYSPLAFGVLSGKYLHGARPADGRITLFERFVRYKAPQVETA-VEAYVALARKHGLDP 291 Query: 279 AQMAIAWVLRDARVTSALIGARTVEQLDDALDALK 313 AQMA+A+V +TS +IGA T+ QL LD++ Sbjct: 292 AQMALAYVNTRPFLTSTIIGATTLGQLQSNLDSIN 326 >gi|152981140|ref|YP_001355236.1| aldo/keto reductase family oxidoreductase [Janthinobacterium sp. Marseille] Length = 277 Score = 87.4 bits (215), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 92/306 (30%), Positives = 134/306 (43%), Gaps = 52/306 (16%) Query: 22 SGLLLPAISLGLWQNFGGVDNFETGRAILRRAFDRGVTHFDLANNYGPPAGSAEDNFGRW 81 SGL +P + G W A LR D G+T D A YG G++E G Sbjct: 8 SGLAVPVLGQGTWYMGDEAHRRADEIASLRLGLDLGMTLIDTAEMYGD--GASEKLVGEA 65 Query: 82 MAKDFLPYRDELVISSKAGWQMWPGPYGGPSGA-RKHLIASCEQSLKRMGLDYVDIFYSH 140 +A RDE+ + SK PS A R IA+CE+SL+R+G D +D++ H Sbjct: 66 IAG----RRDEVFLVSKV----------LPSNASRSGTIAACERSLRRLGTDCIDLYLLH 111 Query: 141 RVDPDTPLEETMGALAHLHRQGKALYVGISSYSPELTRQAAAILKSEGVPLLIHQPNYSM 200 TP ET+ A L GK + G+S+ + R+ A G + +Q Y++ Sbjct: 112 WRG-RTPFAETIAAFEALQDAGKIRHWGVSNMDVDDMREIAR--APGGDAMATNQVLYNL 168 Query: 201 LNRAIEGGLLPALEELGVGCIGFSPLAQGLLTSKYLGGVPEGARVTRAPSLPQRMLSEEN 260 R IE LLP + G+ + +SP+ QG LT PE Sbjct: 169 TRRGIEFDLLPQAQARGLPLMAYSPIEQGRLTE-----YPE------------------- 204 Query: 261 LARIRALNEIAQQRGQTLAQMAIAWVLRDARVTSALIGARTVEQLDDALDALKKPDFSAD 320 + +IA + G T AQ+A+AWVLR V A+ A T E + + AL +A+ Sbjct: 205 ------VLDIADRHGVTPAQVALAWVLRQEGVI-AIPKASTPEHVRENRAALDL-QLTAE 256 Query: 321 ELARID 326 +L +D Sbjct: 257 DLEELD 262 Database: BlastDatabases/707/707 Posted date: Apr 13, 2011 12:58 PM Number of letters in database: 1,221,021 Number of sequences in database: 3697 Lambda K H 0.319 0.136 0.409 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 3697 Number of Hits to DB: 808,948 Number of extensions: 33649 Number of successful extensions: 114 Number of sequences better than 1.0e-08: 4 Number of HSP's gapped: 103 Number of HSP's successfully gapped: 4 Length of query: 344 Length of database: 1,221,021 Length adjustment: 84 Effective length of query: 260 Effective length of database: 910,473 Effective search space: 236722980 Effective search space used: 236722980 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits) S2: 130 (54.7 bits)