BLASTP 2.2.18 [Mar-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0001.4383.p
         (432 letters)

Database: BlastDatabases/707/707 
           3697 sequences; 1,221,021 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|152980491|ref|YP_001354980.1| UDP-N-acetylglucosamine 1-carbo...   186   2e-48

>gi|152980491|ref|YP_001354980.1| UDP-N-acetylglucosamine
           1-carboxyvinyltransferase [Janthinobacterium sp.
           Marseille]
          Length = 416

 Score =  186 bits (473), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 127/430 (29%), Positives = 206/430 (47%), Gaps = 14/430 (3%)

Query: 1   MSNLIVHGGRPLRGDITPSANKNAVLPILCATLLTDQPLRLIGIPEITDVKKILEIFRVL 60
           M  L++ GG  L G+I  S  KNA LPILCA LLT   ++L  +P + DV  IL + R +
Sbjct: 1   MDKLLIQGGHRLSGEIAISGAKNAALPILCAGLLTADTVQLSNVPNLQDVTTILRLLRQM 60

Query: 61  GSEVAVDYASGILELHHRATRFDPKVHHLPEEMRSSIMLVPPLLARFGVARLENDVKGCT 120
           G     D    +L  +  A       + + + MR+SI+++ PLLARFG A++     GC 
Sbjct: 61  GLRAEQDGDKVVL--NGSAIDKLEAPYEMVKTMRASILVLGPLLARFGEAKVSLP-GGCA 117

Query: 121 LGVREIDPHVEVFQRFGARVESSPDSLIIRSAAMQANHHWLDYASVTTTENFVLCAAAAA 180
           +G R +D H++  Q  GA V      +  ++  ++      D  +VT TEN ++ A  A 
Sbjct: 118 IGSRPVDQHIKGLQAMGAEVTIEAGYIHAKAKKLKGTRIVTDMITVTGTENLLMAATLAD 177

Query: 181 GESVLTNAASEPHVQEFCRFMAMMGVEIEGIGTSRVTVRGGGKLGGGEFRFDEDFHEIAT 240
           GE++L NAA EP V +    +  MG +IEGIGT R+ ++G  +L G       D  E AT
Sbjct: 178 GETILENAAREPEVTDLANLLVAMGAKIEGIGTDRLVIQGVERLHGATHAVIADRIETAT 237

Query: 241 FLAMGAITGGQVRVRNSAPEQFPLIDRTFAKFGVEVVHENGWSHTRQNGPLKVVKPFTSN 300
           F+   A  GG V +RN+  +   +      + G  +   + W   +     K V   T+ 
Sbjct: 238 FMCAVATVGGDVTLRNARTDTLDVAFDKLREAGAILTSGDDWIRVQMASRPKAVSFRTTE 297

Query: 301 ILTKVEAAPWPYLPVDLLPIFIALGVKAEGNTMFWNKIYDGAMGWSSELSKFGAHVFLGD 360
                    +P  P D+   F+A+   AEG++     I++       E+++ GA + + +
Sbjct: 298 ---------YPGFPTDMQAQFMAMNCVAEGSSRVIETIFENRFMHVQEMNRLGAAITI-E 347

Query: 361 PHRLITFGGLPLSPASVESPYIIRVAIALFMVAASIEGRSEIRNALPIRRAHPKFVENLR 420
            H  I  G   L  A V +   +R + +L + A + EG + I     + R + +    L 
Sbjct: 348 GHTAIINGVDKLVGAPVMATD-LRASASLVIAALAAEGETLIDRIYHLDRGYDRMEVKLS 406

Query: 421 SLGAVVDWVE 430
           ++GA +  V+
Sbjct: 407 AVGAQIQRVK 416


  Database: BlastDatabases/707/707
    Posted date:  Apr 13, 2011 12:58 PM
  Number of letters in database: 1,221,021
  Number of sequences in database:  3697
  
Lambda     K      H
   0.322    0.138    0.417 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 3697
Number of Hits to DB: 1,003,417
Number of extensions: 41144
Number of successful extensions: 98
Number of sequences better than 1.0e-08: 1
Number of HSP's gapped: 95
Number of HSP's successfully gapped: 1
Length of query: 432
Length of database: 1,221,021
Length adjustment: 86
Effective length of query: 346
Effective length of database: 903,079
Effective search space: 312465334
Effective search space used: 312465334
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 131 (55.1 bits)