BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0001.4369.p (691 letters) Database: BlastDatabases/707/707 3697 sequences; 1,221,021 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gi|152982227|ref|YP_001351952.1| TonB-dependent receptor [Janthi... 72 8e-14 gi|152982674|ref|YP_001352781.1| outer membrane hemin/siderophor... 67 3e-12 gi|152980274|ref|YP_001355313.1| FecA iron(III) dicitrate transp... 67 3e-12 gi|152981186|ref|YP_001352782.1| hypothetical protein mma_1092 [... 62 1e-10 gi|152980708|ref|YP_001355309.1| TonB-dependent receptor for iro... 61 3e-10 >gi|152982227|ref|YP_001351952.1| TonB-dependent receptor [Janthinobacterium sp. Marseille] Length = 728 Score = 72.4 bits (176), Expect = 8e-14, Method: Compositional matrix adjust. Identities = 85/342 (24%), Positives = 139/342 (40%), Gaps = 28/342 (8%) Query: 1 MSKLSGRR--PRHLHRVRPIVKLTALSGLLALGAAPWAL-AQSASAAEDSSLSLGTVEVN 57 +++ S RR P HR L ALS L A A+ AQ A+ + ++ + + Sbjct: 5 VNQASRRRIAPPTTHRA-----LRALSASAVLCMASGAIYAQEATPQVEDTVVVKGKALT 59 Query: 58 ARRSGPLQLNNVLTSVDLIGADHIQQQQVQYNWELFAQSPGVMLTQFRQGNESGKLSLRG 117 L+LN V + + I ++ +++ V+ ++ A PGV G + K+S+RG Sbjct: 60 GEAKAKLKLNEVSGATNFISSEDAERRSVRTAQDILAYQPGVFAQAASGGGDGIKISIRG 119 Query: 118 F-----NGEGEVNAVKLLIDGVPSNDNAGGMPFLGTLLPLNIERIEVVRGTNDARYGLHN 172 G L DG+P + GG P+ PL +E EV+RG N YG + Sbjct: 120 SAINRGGGNSFRTGTYFLFDGLPVS-GPGGTPYE-LFEPLGLEYTEVLRGANAFDYGANT 177 Query: 173 IAGNINILTREGGNYDE--ARLTYGSFNTRQLQVVKGVENGNWSQNYFLGYEKSDGYRQH 230 + G IN +T+ G D + GSF ++Q+ G G + + DGY+ Sbjct: 178 LGGAINYVTKTGRTADPFAVHVEGGSFGYHKVQLSGGKVIGPLDYYFSITEASRDGYQAQ 237 Query: 231 AQGENIAFSGKWFYTSDDGRYRTGLSIRHANGYAQEPGYLTAQDARRDPTASYAYAQSDG 290 ++ + + Y + +T +R+ Q PG LT DP + A A + Sbjct: 238 SRSSSNGIAANIGYQINP-DVQTRFYLRYRETKNQSPGNLTRAQIDADPRQANALAIAQN 296 Query: 291 GNRQM-------DQVSLHFDAEVDAQLSLATKLYLNRVRDQR 325 R ++ S+ D L L +Y N D R Sbjct: 297 ALRDQPGSTWLANKTSIRLDGSSQLDLGL---VYHNYPIDSR 335 >gi|152982674|ref|YP_001352781.1| outer membrane hemin/siderophore receptor protein [Janthinobacterium sp. Marseille] Length = 666 Score = 67.4 bits (163), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 64/221 (28%), Positives = 100/221 (45%), Gaps = 9/221 (4%) Query: 75 LIGADHIQQQQVQYNWELFAQSPGVMLTQFRQGNESGKLSLRGFNGEGEVNAVKLLIDGV 134 +I A+ I++ + E + GV Q G L LRGF + N V +L+DG+ Sbjct: 62 VITAEQIREAGIGNVNEAIRKIGGVYGRQSPYGTSDYSLDLRGFGATSDQNMV-VLVDGI 120 Query: 135 PSNDNAGGMPFLGTLLPLNIERIEVVRGTNDARYGLHNIAGNINILTREG-GNYDEARL- 192 ++N +P + + IERIE+VRG + YG G I I+T++G A L Sbjct: 121 RISENEQAVPLMSAIPIDAIERIEIVRGGSSVLYGEGATGGTIQIITKKGLAGATRASLF 180 Query: 193 -TYGSFNTRQLQVVKGVENGNWSQNYFLGYEKSDGYRQHAQGENIAFSGKWFYTSDDGRY 251 GSFN+++++ N+S + L +D YR + + FSG + DG Sbjct: 181 AELGSFNSKEVRASLAKGWDNFSIDANLSGIHTDNYRDNNKLRQDNFSGSMQWAFKDG-- 238 Query: 252 RTGLSIRHANGYAQEPGYLTAQDARRDP---TASYAYAQSD 289 R GL + A + G LT+ ++P T YA D Sbjct: 239 RIGLRVASARQDSGLAGSLTSAQFAQNPRQATTPLDYASID 279 >gi|152980274|ref|YP_001355313.1| FecA iron(III) dicitrate transport protein [Janthinobacterium sp. Marseille] Length = 707 Score = 67.4 bits (163), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 155/734 (21%), Positives = 280/734 (38%), Gaps = 70/734 (9%) Query: 1 MSKLSGRRPRHLHRVRPIVKLTALSGLLALGAAPWALAQSASAAEDSSLSLGTVEVNARR 60 M+K+ R+ L ++ K +A L + + AQ A+ D +L ++V+ Sbjct: 1 MAKIHSRKSVSLRKL----KCSAAVSLAVMVMSGMVHAQQATTTGDEPATLEAIQVSGDL 56 Query: 61 SGPLQLNNV---LTSVDLIGADHIQQQQVQYNWELFAQSPGVMLTQFRQGNESGKLSL-- 115 G N+V + ++ + I+ ++ + PGV ++ G+ +SL Sbjct: 57 LGTGLQNSVKRYAGARTVVKKEEIENSGAASISDVMRRIPGVQVSD-NSGSAGSAISLNV 115 Query: 116 --RGFNGEGEVNAVKLLIDGVPSNDNAGGMPFLGTLLPL---NIERIEVVRGTNDARYGL 170 RG G + +L+DG+P + G P L + P+ N+E ++VVRG RYG Sbjct: 116 GVRGLAGRYSPRST-ILLDGIPMANAPYGQPQL-SFAPVSLNNVESVDVVRGGGAVRYGP 173 Query: 171 HNIAGNINILTREGGNYDEARLTYGSFNTRQLQVVKGVENGNWSQNYFLGYEKSDGYRQH 230 N+ G IN TR A G + RQ KG N +S F G + +G Sbjct: 174 QNVGGIINFKTRSIPTTPGAT---GDVSIRQNDYSKGGSNTQYSA--FAGNQLENGL--- 225 Query: 231 AQGENIAFSG----KWFYTSDDGRYRTGLSIRHANGYAQE--------------PGYLTA 272 G + +SG W SD+ L R+ E PG LT Sbjct: 226 --GFAVLYSGMSGSDWRVGSDEKVNDLALKFRYELSPTSEIYGKFSYYDVTSRTPGGLTV 283 Query: 273 QDARRDPTASYAYAQSDGGNRQMDQVSLHFDAEVDAQLSLATKLYLNRVRDQRWLRYSST 332 DP + G+R + + + D Q + Y N Q L + Sbjct: 284 AQYNADPFQNTRPTDYWSGDRTAFDIG-YINTISDTQ-EFEIRTYYNESNRQSTLYTVNR 341 Query: 333 TSQQERIIDE--THYGLLSTATYRPQWKALAGLNDLALEGGFNLERQEDQSPRYSTVNKV 390 T+ I + ++ L Y ++ ND+ + + ER +D S Sbjct: 342 TTNAVSIQHQPRSYQTLGIEPRYTQRFNIGNTTNDVTVGYRYIRERGDDNVYSESVTTGA 401 Query: 391 RVVQTRDHHFVFDTVGAYVQAVITPVSSLRIIPGYRVDHVGGRFNDPSRGVSYGIQDYGI 450 QT + D Y+ I + RI PG R +H+ +D + G + +++ Sbjct: 402 LGAQTTFDNST-DAHSIYIDDKIA-FGAWRITPGVRFEHINSLRHDRTTGADFEVKNNKP 459 Query: 451 IKQPKLSLVYSPFQQASLYANWGRTFQVGAGAAA-YKSNNNDLRPSINDGWETGIKFTPA 509 + P L++ Y Q +L+AN+G +F V + N L+P + E G ++ + Sbjct: 460 L--PSLNVAYLLTQDITLFANYGTSFGVVQNTQLNTMTPGNPLKPELAKTVEAGARW-KS 516 Query: 510 DWLDGRVAVWEQRASDEVKRRLNDPTGDSENVGRTKRSGVDLQLNLRAGKRTTV--WLAY 567 + + + R ++++ + N+G+T+ G++ ++ K + + A+ Sbjct: 517 KQVSAEITAFNIRFDNQIQSVGSGANLAFFNLGKTEHKGIETAVDYTFDKAGPMSGFNAF 576 Query: 568 SRQKSEIVTPDPSAPDTMGKEIDHVPRAVYSGGVDYQASAALKLSASVNGQGSYYLTTAN 627 + T + A G ++ R + G+ Y+ + + S Q S + N Sbjct: 577 ANYTYTRATLESGA--FAGNDVPFYSRNTDTVGMRYE-TGPWGFNLSSTHQSSQFADERN 633 Query: 628 T--------GGKFGGYTLFNASATYQVTPSLSLELQ--LKNLANRYYEYVWINDQTRHAP 677 T G G+ L+NA ++ LE+ L NL ++ Y + Sbjct: 634 TVAESVNGENGLIPGFRLWNAQVNWKSPNKKGLEILAGLNNLTDKRYFTRTTDGNLGKLV 693 Query: 678 GDGRAVYVSANVKY 691 G R +YV A + + Sbjct: 694 GAPRMIYVQARLAF 707 >gi|152981186|ref|YP_001352782.1| hypothetical protein mma_1092 [Janthinobacterium sp. Marseille] Length = 623 Score = 61.6 bits (148), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 149/660 (22%), Positives = 257/660 (38%), Gaps = 94/660 (14%) Query: 30 LGAAPWALAQSASAA--------EDSSLSLGTVEVNARRSGPLQLNNVLTSVDLIGADHI 81 L P A+A S SAA + SL V V A R+ + ++VL+ +I ++ I Sbjct: 11 LAFPPLAIALSVSAAFSPLSFAQTPADQSLEPVLVTASRTAQ-KASDVLSDNLVITSEEI 69 Query: 82 QQQQVQYNWELFAQSPGVMLTQFRQGNESGKLSLRGFNGEGEVNAVKLLIDGVPSNDNAG 141 QQ +L + G+ +T+ S + LRG + + + LLIDGV S Sbjct: 70 QQSGQSSLIDLLQRKRGIEITRNGGPGTSSTVYLRGSSSK----QIILLIDGVRSASATT 125 Query: 142 GMPFLGTLLPLNIERIEVVRGTNDARYGLHNIAGNINILTREGGN--YDEARLTYGSFNT 199 G P ++ I+RIEVV G + YG G I + T++G + A G++ T Sbjct: 126 GEPSWSSIPLSQIDRIEVVFGPLSSMYGADATGGVIQVFTKQGAGAPHVTASAGAGTYGT 185 Query: 200 RQLQV-VKGVENGNWSQNYFLGYEKSDGYRQHAQGENIA--FSGKWFYTSDDGRYRTGLS 256 ++ + V G +G+ Y + R+ A+G N G + DG +T S Sbjct: 186 KEYTLGVSGSTDGDHKLRYSF-----NSSREEAKGFNATNPLVGSGYAPDKDGYTKTSNS 240 Query: 257 IRHANGYAQEPGYLTAQDAR-RDPTASYAYAQSDGGNRQMDQVSLHFDAEVDAQLSLATK 315 G ++ + AR ++ A++ S N Q D +DA A + + T Sbjct: 241 -----------GRISWELARGQEIGATFLQTSS---NSQFDSGLPRYDARNYADVGIYTV 286 Query: 316 LYLNRVRDQRW--LRYSSTTSQQERIIDETHYGLLSTATYRPQWKALAGLNDLALEGGFN 373 N++ W L S +S + Y +++ + + W+ ND+ L G + Sbjct: 287 YSRNQITSN-WGSLFQVSKSSDKLNSYTSNPYSSINSESTQVSWQ-----NDIKL--GTD 338 Query: 374 L-----ERQEDQSPRYSTVNKVRVVQTRDHHFVFDTVGAYVQAVITPVSSLRIIPGYRVD 428 L E +++++ N+ R + + ++ G + Sbjct: 339 LLQVITEHKKEEAVTNQPFNRDRTTNSLALAY-------------------QLQRGAHIG 379 Query: 429 HVGGRFNDPSRGVSYGIQDYGIIKQPKLSLVYSPFQQASLYANWGRTFQVGAGAAAYKS- 487 +V R++D S YG L Y ++ + + G +F+ Y + Sbjct: 380 NVSTRYDDNSA--------YGSNVTGSLGYGYRLSKELRISGSVGTSFRAPTFNELYYAG 431 Query: 488 -NNNDLRPSINDGWETGIKFTPADWLDGRVAVWEQRASDEVKRRLNDPTGDSENVGRTKR 546 N D++P E GI + D VA + R ++ + + PT + + Sbjct: 432 YGNPDIQPEKGRNAEVGIYYDDGKS-DASVAFYRNRITNMIVTKTPCPTSGTGSCAYNVN 490 Query: 547 SGVDLQLNLRAGKRTTVWLAYSRQKSEIVTPDPSAPDTMGKEIDHVPRAVYSG--GVDYQ 604 + L++ AG R + Y T D P K RA Y G GVDY Sbjct: 491 EALLTGLSMGAGTRFGDFRLYG-------TLDLQNPKDETKNTLLERRARYHGTLGVDY- 542 Query: 605 ASAALKLSASVNGQGSYYLTTANTGGKFGGYTLFNASATYQVTPSLSLELQLKNLANRYY 664 + A V+ GS + + +N GGY L N +ATY ++ L + N+ ++ Y Sbjct: 543 VNQKFTAGADVSFSGSRF-SDSNNKQPLGGYALLNLNATYNLSDDWQLFARWNNVLDKNY 601 >gi|152980708|ref|YP_001355309.1| TonB-dependent receptor for iron transport [Janthinobacterium sp. Marseille] Length = 751 Score = 60.8 bits (146), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 74/278 (26%), Positives = 118/278 (42%), Gaps = 42/278 (15%) Query: 436 DPSRGVSYGIQDYGIIKQPKLSLVYSPFQQASLYANWGRTFQVGAGA---AAYKSNN--- 489 DP R +S + + KL V+ P S+YA W +FQ GA + SNN Sbjct: 494 DPDRKLSDTLLSW------KLGAVFKPASNGSIYAGWSTSFQPPGGANFSLSTNSNNQAS 547 Query: 490 NDLRPSINDGWETGIKFTPADWLDGRV----AVWEQRASDEVKRRLNDPTGDSENVGRTK 545 ++L P E G K+ D D RV A++ + E+ P S+ +G+ + Sbjct: 548 SNLDPQEGSNIEIGTKW---DLFDNRVSATAAIYRSQNKKELISDGATPPSYSQ-LGKRR 603 Query: 546 RSGVDLQL--NLRAGKRTTVWLAYSRQKSEIVTPDPSAPDTMGKEIDHVPRAVYSGGVDY 603 GV+L L + T LAY S+IV P G I P+ ++ + Y Sbjct: 604 VDGVELGLVGMITPNLNITTGLAY--MDSKIVR---GTPANEGGVIVFSPKLTFTSWLTY 658 Query: 604 QASAALKLSASVNGQGSYYLTTANTGGK----------FGGYTLFNASATYQVTPSLSLE 653 + + + G G+ Y+ TA Y + NA A+Y V +LSL+ Sbjct: 659 KLPNGVTI-----GGGARYVDTAARSSNVTQAPTNLWTMPDYWVGNAMASYDVNKNLSLQ 713 Query: 654 LQLKNLANRYYEYVWINDQTRHAPGDGRAVYVSANVKY 691 L + N+ N+ Y + +R+ PG R ++AN+K+ Sbjct: 714 LNINNVFNKKYISRINSGGSRYQPGPERNALLTANLKF 751 Database: BlastDatabases/707/707 Posted date: Apr 13, 2011 12:58 PM Number of letters in database: 1,221,021 Number of sequences in database: 3697 Lambda K H 0.315 0.133 0.392 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 3697 Number of Hits to DB: 1,672,076 Number of extensions: 72519 Number of successful extensions: 226 Number of sequences better than 1.0e-08: 10 Number of HSP's gapped: 228 Number of HSP's successfully gapped: 10 Length of query: 691 Length of database: 1,221,021 Length adjustment: 90 Effective length of query: 601 Effective length of database: 888,291 Effective search space: 533862891 Effective search space used: 533862891 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.6 bits) S2: 133 (55.8 bits)