BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0001.4355.p (311 letters) Database: BlastDatabases/707/707 3697 sequences; 1,221,021 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gi|152981382|ref|YP_001352082.1| FAA-hydrolase family protein [J... 121 6e-29 gi|152981074|ref|YP_001352986.1| FAA-hydrolase family protein [J... 98 8e-22 gi|152980853|ref|YP_001353875.1| FAA-hydrolase family protein [J... 96 2e-21 >gi|152981382|ref|YP_001352082.1| FAA-hydrolase family protein [Janthinobacterium sp. Marseille] Length = 255 Score = 121 bits (303), Expect = 6e-29, Method: Compositional matrix adjust. Identities = 85/227 (37%), Positives = 122/227 (53%), Gaps = 25/227 (11%) Query: 77 NVKLLAPIPRPRKNIFGIGLNYVEHVEESSRTLDTSKDLPKQPVIFSKPPTTVIGQGDAI 136 +VK+L P +P K I + N+ E ++ L+ + P +P+ K P + + G+ I Sbjct: 46 DVKVLMP-AQPTK-IIAMWNNF----HELAKKLNLAD--PAEPLYLIKAPNSYLNPGETI 97 Query: 137 EHNQAITRQMDWEVELAVIIGKQAKGVSQASALDYVFGYSVMNDISA-----RDNRRAGQ 191 + ++ +E EL ++IGK AK VS+A A+DYVFGY+V ND++ RD A Q Sbjct: 98 QK-PPTDDKVVFEGELGIVIGKTAKAVSEADAMDYVFGYTVANDVTVATILNRDESFA-Q 155 Query: 192 WIYSKGQDTYAPFGPVIVTADEIPDPHNLDLSLTVNGVTKQSSNTRHMLFKVDTLIADIS 251 W+ +KG DT+ PFGP I T DP L + +NG +Q+ M F L++ IS Sbjct: 156 WVRAKGLDTFCPFGPTIATD---LDPTTLVVKTVLNGDVRQNYPISDMRFSTQQLVSMIS 212 Query: 252 AGITLEPGDIIATGTPAGVGAGRSPQEWMWPGDVVVATVEKIGSLRN 298 A +TL PGDII GT GVG+ M PG VV + IG L N Sbjct: 213 ADMTLFPGDIILCGTSVGVGS-------MKPGSVVEVEIAGIGKLTN 252 >gi|152981074|ref|YP_001352986.1| FAA-hydrolase family protein [Janthinobacterium sp. Marseille] Length = 228 Score = 97.8 bits (242), Expect = 8e-22, Method: Compositional matrix adjust. Identities = 66/193 (34%), Positives = 97/193 (50%), Gaps = 12/193 (6%) Query: 85 PRPRKNIFGIGLNYVEHVEESSRTLDTSKDLPKQPVIFSKPPTTVIGQGDAIEHNQAITR 144 P P I+ +G NY EH E D + P F KP ++ I + Q +T+ Sbjct: 21 PFPVGRIYCVGRNYAEHAREMGHDPDR-----EPPFFFMKPADAIVQNNANIPYPQ-LTQ 74 Query: 145 QMDWEVELAVIIGKQAKGVSQASALDYVFGYSVMNDISARD----NRRAGQ-WIYSKGQD 199 + E+E+ V IGK ++ +AL++VFGY V D++ RD ++ G+ W K D Sbjct: 75 DLHHEIEMIVAIGKGGADIAVENALEHVFGYGVGLDMTRRDIQGQAKKMGRPWEMGKAFD 134 Query: 200 TYAPFGPVIVTADEIPDPHNLDLSLTVNGVTKQSSNTRHMLFKVDTLIADISAGITLEPG 259 AP I I P+ + L +NG KQ + +++ V IA +S ITL PG Sbjct: 135 NSAPC-TAITPVTTIGHPNKGAVWLKINGELKQKGDLADLIWNVQETIAYLSQLITLRPG 193 Query: 260 DIIATGTPAGVGA 272 D+I +GTPAGVGA Sbjct: 194 DLIMSGTPAGVGA 206 >gi|152980853|ref|YP_001353875.1| FAA-hydrolase family protein [Janthinobacterium sp. Marseille] Length = 265 Score = 96.3 bits (238), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 65/193 (33%), Positives = 98/193 (50%), Gaps = 14/193 (7%) Query: 87 PRKNIFGIGLNYVEHVEESSRTLDTSKDLPKQPVIFSKPPTTV--IGQGDAIEH-NQAIT 143 P + I+ IG NY H E D +++ P F KP + + G ++H +T Sbjct: 56 PVRRIYCIGRNYAAHAREMGS--DPTRE---PPFFFQKPSDAIQYVAPGKVVDHPYPTLT 110 Query: 144 RQMDWEVELAVIIGKQAKGVSQASALDYVFGYSVMNDISARDNRRAGQ-----WIYSKGQ 198 + +E+EL I K K +S +AL +VFGY+V D++ RD + A + W K Sbjct: 111 KNYHYEIELVAAINKGGKNISVENALQHVFGYAVGLDMTRRDLQAAMKKEEKPWEIGKSF 170 Query: 199 DTYAPFGPVIVTADEIPDPHNLDLSLTVNGVTKQSSNTRHMLFKVDTLIADISAGITLEP 258 D AP GP+ A I + + L VNG KQS++ + M++ V I+++S L P Sbjct: 171 DMSAPIGPLHPVAS-IGNFTEGKIWLKVNGQVKQSADLKQMIWSVAEQISNLSKAFELMP 229 Query: 259 GDIIATGTPAGVG 271 GDII +GTP VG Sbjct: 230 GDIIYSGTPENVG 242 Database: BlastDatabases/707/707 Posted date: Apr 13, 2011 12:58 PM Number of letters in database: 1,221,021 Number of sequences in database: 3697 Lambda K H 0.317 0.135 0.400 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 3697 Number of Hits to DB: 778,130 Number of extensions: 34486 Number of successful extensions: 107 Number of sequences better than 1.0e-08: 3 Number of HSP's gapped: 101 Number of HSP's successfully gapped: 3 Length of query: 311 Length of database: 1,221,021 Length adjustment: 83 Effective length of query: 228 Effective length of database: 914,170 Effective search space: 208430760 Effective search space used: 208430760 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.6 bits) S2: 129 (54.3 bits)