BLASTP 2.2.18 [Mar-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0001.4354.p
         (341 letters)

Database: BlastDatabases/707/707 
           3697 sequences; 1,221,021 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|152980899|ref|YP_001354766.1| nitrilase [Janthinobacterium sp...   325   3e-90
gi|152979847|ref|YP_001354170.1| nitrilase [Janthinobacterium sp...   151   5e-38

>gi|152980899|ref|YP_001354766.1| nitrilase [Janthinobacterium sp.
           Marseille]
          Length = 355

 Score =  325 bits (832), Expect = 3e-90,   Method: Compositional matrix adjust.
 Identities = 166/345 (48%), Positives = 223/345 (64%), Gaps = 11/345 (3%)

Query: 1   MLELQRFKAAAVQAAPVFLNTDATVDKVVALIAEAASHGARLVAFPEVFVAGYPYWSWIM 60
           M E  +FKAAA  AAP++ +T AT+DK   LIAEAA +GA L+AFPE FV+ +P W  + 
Sbjct: 1   MKEYPKFKAAACHAAPIYFDTPATIDKACDLIAEAARNGASLIAFPEAFVSAFPIWCGVW 60

Query: 61  NPIEGSSWFERLARSAIEIPGPEISKIAQAAARHQVNVVVGVNERNRHGIGTIYNTVVTI 120
            P+E   +F +LA SAIEI GPE++++ +AA RH V V +G+NE     +G +++T + I
Sbjct: 61  APVETHEFFFKLASSAIEINGPEVAQLREAARRHGVFVSMGINEGTPISMGCVWDTNILI 120

Query: 121 ADDGRIIGRHRKLVPTWAEKLTWAPGDASGLRVHQTSVGPLGALACGENTNTLARFSLLA 180
            DDG I+ RHRKL+ T  EKL WA GD SGLRV  T +G +GAL CGENTN LARFSL+A
Sbjct: 121 GDDGSILNRHRKLIATHWEKLAWASGDGSGLRVVDTRIGRIGALVCGENTNALARFSLMA 180

Query: 181 QGELVHVASYIA-LPVAPAD---YDMAEAIKVRAAAHCFEGKVFTIVSCSTVSEEIIQAM 236
           QGE VH+++Y    P  P+    YD+  +I++RA A  FEGK+F IV+   +  E I  +
Sbjct: 181 QGENVHISAYSPRWPTHPSGEVAYDLEASIRLRAGAAAFEGKMFNIVASGFLPPEAIDMI 240

Query: 237 EASHPQARALLSRRNSAFSGVLGPDGRVIGTPLIDEEGIVYADIDLSRCIQPRQMHDITG 296
             + P+ R L+   + + S ++GPDG  I   L DEEGIVYADIDL++C+ P+Q  D+ G
Sbjct: 241 SRNDPRVRRLMEEASKSVSMIMGPDGMPISDTLQDEEGIVYADIDLAKCVVPKQFQDVVG 300

Query: 297 HYNRFDVFNLSVNRKPLQAAHFAGDEGYAEEA-------PAPTLT 334
           +YNRFDVF L VNR+ L    F      AE A       P P L+
Sbjct: 301 YYNRFDVFELKVNRRALTPVEFNDAAAEAERAQFAAELGPLPALS 345


>gi|152979847|ref|YP_001354170.1| nitrilase [Janthinobacterium sp.
           Marseille]
          Length = 316

 Score =  151 bits (382), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 105/326 (32%), Positives = 160/326 (49%), Gaps = 30/326 (9%)

Query: 7   FKAAAVQAAPVFLNTDATVDKVVALIAEAASHGARLVAFPEVFVAGYPYWSWIMNPI--- 63
           FK A  QAA    +  A+  K V LI +A   GA L+ FPE F+ GYP  +    P+   
Sbjct: 4   FKVAVAQAASHPDDAQASTAKAVDLIGQAHRAGAGLLVFPEAFLGGYPKGASFGAPVGMR 63

Query: 64  --EGSSWFERLARSAIEIPGPEISKIAQAAARHQVNVVVGVNERNRHGIGTIYNTVVTIA 121
             EG   +     +AI++ GPE+  IA+A     +  V+G  ER    +GT+Y TV+   
Sbjct: 64  KPEGRQAYLDYFNNAIDLKGPEVEAIAEATRNTGMFAVIGCIERE---LGTLYCTVLFFN 120

Query: 122 DDGRIIGRHRKLVPTWAEKLTWAPGDASGLRVHQTSVGPLGALACGENTNTLARFSLLAQ 181
               ++G+HRKL+PT  E+L W  GD S + V  T +G +GA+ C EN   + R  + +Q
Sbjct: 121 GAQGLVGKHRKLMPTAGERLIWGFGDGSTMPVFDTPLGKIGAVICWENYMPMLRMYMYSQ 180

Query: 182 GELVHVASYIALPVAPADYDMAEAIKVRAAAH-CFEGKVFTIVSCSTVSEEIIQAMEASH 240
           G        I +  AP   D      V +  H   EG+ F + +C  +      A  A+H
Sbjct: 181 G--------IGIYCAPTADD--RDTWVPSMQHIALEGRCFVLTACQYIKRS---AYPATH 227

Query: 241 PQA-----RALLSRRNSAFSGVLGPDGRVIGTPLIDEEGIVYADIDLSRCIQPRQMHDIT 295
             A       +L R  SA   ++ P G+V+  P  + E ++YA+ID  + ++ +   D+ 
Sbjct: 228 ECALGDDPETVLMRGGSA---IIDPLGKVLAGPNFEGEALLYAEIDTDQIVRGKFDFDVA 284

Query: 296 GHYNRFDVFNLSVNRKPLQAAHFAGD 321
           GHY R DVF L+V+ +   A +   D
Sbjct: 285 GHYARPDVFQLAVDTRAKSAVNIQQD 310


  Database: BlastDatabases/707/707
    Posted date:  Apr 13, 2011 12:58 PM
  Number of letters in database: 1,221,021
  Number of sequences in database:  3697
  
Lambda     K      H
   0.320    0.134    0.402 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 3697
Number of Hits to DB: 811,765
Number of extensions: 33421
Number of successful extensions: 90
Number of sequences better than 1.0e-08: 2
Number of HSP's gapped: 87
Number of HSP's successfully gapped: 2
Length of query: 341
Length of database: 1,221,021
Length adjustment: 84
Effective length of query: 257
Effective length of database: 910,473
Effective search space: 233991561
Effective search space used: 233991561
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 130 (54.7 bits)