BLASTP 2.2.18 [Mar-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0001.4277.p
         (467 letters)

Database: BlastDatabases/707/707 
           3697 sequences; 1,221,021 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|152979935|ref|YP_001355131.1| bifunctionnal glucosamine-1-pho...   699   0.0  

>gi|152979935|ref|YP_001355131.1| bifunctionnal
           glucosamine-1-phosphate N-acetyltransferase /
           UDP-N-acetylglucosamine pyrophosphorylase
           [Janthinobacterium sp. Marseille]
          Length = 452

 Score =  699 bits (1805), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 339/452 (75%), Positives = 390/452 (86%)

Query: 16  MNIVILAAGMGKRMQSSLPKVLHPLAGKPLLGHVIDTARELAPTQLCVIYGHGGDAVPKA 75
           MNIVILAAGMGKRMQS+LPKVLHPLAGKPLL HVIDTAR+L+P++LCVIYGHGG+ VP+ 
Sbjct: 1   MNIVILAAGMGKRMQSALPKVLHPLAGKPLLSHVIDTARQLSPSRLCVIYGHGGEQVPQL 60

Query: 76  FAGQGLSFALQEPQLGTGHAVMQALPHLDDAAPTLVLYGDVPLTSASSLQRLLVAAGQDK 135
              + LSFA QEPQLGTGHAVMQA+P LDD  PTL+LYGDVPLT+A+SLQRLL +AG DK
Sbjct: 61  LQAKDLSFAKQEPQLGTGHAVMQAVPQLDDHTPTLILYGDVPLTTAASLQRLLDSAGNDK 120

Query: 136 LGVLTVTLDNPTGYGRIVREDGRIKRIVEQKDASQAELAIGEVNTGIIVAPTARLRQWLA 195
           LG+LTV L NPTGYGRIVRE+G I RIVEQKDA  AEL I E+NTGI+VAPTA L++WLA
Sbjct: 121 LGILTVNLGNPTGYGRIVRENGAITRIVEQKDAKPAELEINEINTGIMVAPTAALKRWLA 180

Query: 196 KLSNHNAQGEYYLTDVIAAAVADGVDVVSAQPDDVAETLGVNSKVQLAELERVHQRNIAH 255
           KLSN+NAQGEYYLTD++A+AVADGV VVSAQPD   ET GVNSKVQLAELER+HQRNIAH
Sbjct: 181 KLSNNNAQGEYYLTDIVASAVADGVAVVSAQPDHEWETHGVNSKVQLAELERIHQRNIAH 240

Query: 256 RLLEAGVTLADPARIDVRGSLECARDVSIDVNCVFEGQVSIGEGSTIGAHCVIRNARIAA 315
            LLE GVTLADPARIDVRG+L C RDV+IDV CVFEG VS+ +G  I A+CVI N+ I A
Sbjct: 241 ALLEQGVTLADPARIDVRGTLTCGRDVTIDVGCVFEGDVSLADGVRIDANCVIHNSTIGA 300

Query: 316 GVEIKPFTHIDDAVVGAGGKIGPYARLRPGTELAQDVHIGNFVEVKNSIVGVGSKANHLA 375
              ++P++H ++AVVGA   IGPYARLRPGT LA+DVHIGNFVEVKNS +   SKANHL 
Sbjct: 301 RSHVRPYSHFENAVVGAECIIGPYARLRPGTVLAEDVHIGNFVEVKNSDIAAHSKANHLT 360

Query: 376 YVGDADVGSGVNVGAGVITCNYDGANKFRTIIEDEVFIGSDSQLVAPVRVGKGATIGAGT 435
           YVGD+ VGS VN+GAG ITCNYDG NK RTIIED+VF+GS +QL+AP+RVGKGAT+GAGT
Sbjct: 361 YVGDSTVGSRVNIGAGTITCNYDGVNKSRTIIEDDVFVGSATQLIAPIRVGKGATLGAGT 420

Query: 436 TLTKDAPAGQLTLSRAKQLSLPGWQRPVKIKK 467
           TLTKDAPA +LT+SRAKQ+++  WQRPVKIKK
Sbjct: 421 TLTKDAPADKLTVSRAKQITVDNWQRPVKIKK 452


  Database: BlastDatabases/707/707
    Posted date:  Apr 13, 2011 12:58 PM
  Number of letters in database: 1,221,021
  Number of sequences in database:  3697
  
Lambda     K      H
   0.318    0.136    0.394 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 3697
Number of Hits to DB: 1,136,373
Number of extensions: 52204
Number of successful extensions: 180
Number of sequences better than 1.0e-08: 1
Number of HSP's gapped: 180
Number of HSP's successfully gapped: 1
Length of query: 467
Length of database: 1,221,021
Length adjustment: 87
Effective length of query: 380
Effective length of database: 899,382
Effective search space: 341765160
Effective search space used: 341765160
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 131 (55.1 bits)