BLASTP 2.2.18 [Mar-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0001.4269.p
         (129 letters)

Database: BlastDatabases/707/707 
           3697 sequences; 1,221,021 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|152979860|ref|YP_001355127.1| dihydroneopterin aldolase [Jant...   229   6e-62

>gi|152979860|ref|YP_001355127.1| dihydroneopterin aldolase
           [Janthinobacterium sp. Marseille]
          Length = 131

 Score =  229 bits (583), Expect = 6e-62,   Method: Compositional matrix adjust.
 Identities = 106/127 (83%), Positives = 117/127 (92%)

Query: 3   FLSHPSLQDCRRLFLRNYEVFINIGVHEFEKKGEQRILINVDLYVPLAETTPTADHLDEV 62
           FL HP L DCRRLFLRNYEV INIGVHEFEKKGEQR+LINVDL++PL E+TPTAD+LDEV
Sbjct: 4   FLFHPQLADCRRLFLRNYEVQINIGVHEFEKKGEQRVLINVDLFIPLKESTPTADNLDEV 63

Query: 63  VDYDFIRSTIAERMARGHIHLQETLCDDVMTAMLAHPKVRAVRVSTEKPDVYPDCDSVGV 122
           VDYD++RSTIA+RMA GHIHLQETLCDDV+ AMLAHPKVRA RVSTEKPDVYPDC+SVGV
Sbjct: 64  VDYDYMRSTIAKRMAEGHIHLQETLCDDVVKAMLAHPKVRAARVSTEKPDVYPDCESVGV 123

Query: 123 ETFRIKA 129
           E F+IK 
Sbjct: 124 EVFQIKG 130


  Database: BlastDatabases/707/707
    Posted date:  Apr 13, 2011 12:58 PM
  Number of letters in database: 1,221,021
  Number of sequences in database:  3697
  
Lambda     K      H
   0.325    0.139    0.414 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 3697
Number of Hits to DB: 278,416
Number of extensions: 9873
Number of successful extensions: 35
Number of sequences better than 1.0e-08: 1
Number of HSP's gapped: 35
Number of HSP's successfully gapped: 1
Length of query: 129
Length of database: 1,221,021
Length adjustment: 73
Effective length of query: 56
Effective length of database: 951,140
Effective search space: 53263840
Effective search space used: 53263840
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 124 (52.4 bits)