BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0001.4170.p (161 letters) Database: BlastDatabases/707/707 3697 sequences; 1,221,021 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gi|152981882|ref|YP_001355378.1| L-asparaginase [Janthinobacteri... 239 5e-65 >gi|152981882|ref|YP_001355378.1| L-asparaginase [Janthinobacterium sp. Marseille] Length = 161 Score = 239 bits (611), Expect = 5e-65, Method: Compositional matrix adjust. Identities = 112/161 (69%), Positives = 129/161 (80%) Query: 1 MSLRIIATGGTFDKHYDEIAGQLGFDQSHLPDVIARARITTEVCLETLRLLDSLEMQDAD 60 M+LRIIATGGTFDKHYDEI GQL F HLP VI RARIT + LE L LDSL+M DAD Sbjct: 1 MTLRIIATGGTFDKHYDEITGQLNFSHGHLPQVIKRARITVPLQLEQLPFLDSLDMHDAD 60 Query: 61 RQRVLQACQASPQQAIVIVHGTDTMQQTAQVLGPALSDKTVVLTGAMIPYEIANSDALFN 120 RQR+ +C + + +IV+VHGTDTM++TA+VLG A KT+VLTGAMIPYE+ NSDALFN Sbjct: 61 RQRIAASCLRADETSIVVVHGTDTMRETAEVLGAAQLPKTIVLTGAMIPYEVKNSDALFN 120 Query: 121 FGFACGVAQVLPPGVYVAMNGRIFAWNKVAKNRSAGVFEPI 161 FGFACG+AQ LP GVY+AMN +IF WN V KNRSAGVFE I Sbjct: 121 FGFACGIAQALPHGVYIAMNAQIFTWNNVRKNRSAGVFEKI 161 Database: BlastDatabases/707/707 Posted date: Apr 13, 2011 12:58 PM Number of letters in database: 1,221,021 Number of sequences in database: 3697 Lambda K H 0.322 0.136 0.398 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 3697 Number of Hits to DB: 370,760 Number of extensions: 13400 Number of successful extensions: 49 Number of sequences better than 1.0e-08: 1 Number of HSP's gapped: 49 Number of HSP's successfully gapped: 1 Length of query: 161 Length of database: 1,221,021 Length adjustment: 76 Effective length of query: 85 Effective length of database: 940,049 Effective search space: 79904165 Effective search space used: 79904165 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (22.0 bits) S2: 126 (53.1 bits)