BLASTP 2.2.18 [Mar-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0001.4165.p
         (187 letters)

Database: BlastDatabases/707/707 
           3697 sequences; 1,221,021 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|152981222|ref|YP_001351729.1| alkyl hydroperoxide reductase s...   278   2e-76
gi|152981345|ref|YP_001355069.1| antioxidant protein LsfA [Janth...    70   7e-14
gi|152981397|ref|YP_001352999.1| bacterioferritin comigratory pr...    58   3e-10

>gi|152981222|ref|YP_001351729.1| alkyl hydroperoxide reductase
           subunit C [Janthinobacterium sp. Marseille]
          Length = 187

 Score =  278 bits (710), Expect = 2e-76,   Method: Compositional matrix adjust.
 Identities = 126/187 (67%), Positives = 152/187 (81%)

Query: 1   MSLINTTIKPFKATAYHDGKFVDITEATLKGKWSVFVFYPADFTFVCPTELEDLADNYAE 60
           MSLINT ++PFK  A+H+GKF+++TE +LKGKWSV +F PA FTF CPTE+ED AD+YAE
Sbjct: 1   MSLINTQVQPFKTQAFHNGKFIEVTEQSLKGKWSVLIFMPAAFTFNCPTEVEDAADSYAE 60

Query: 61  FKKLGVEIYGVSTDTHFAHKAWHDTSEAIKKVQYPLVGDPTATLARNFEVLIEEEGLALR 120
           F+KLG E+Y V+TDTHF+HK WH+TS A+ K ++PLVGDPT  L   F V I EEGL+LR
Sbjct: 61  FQKLGTEVYIVTTDTHFSHKVWHETSPAVGKAKFPLVGDPTHQLTNAFGVHIPEEGLSLR 120

Query: 121 GTFVINPEGEIKVMEVHDNGIGRDASELLRKVKAAQYVASHPGEVCPAKWEEGAATLKPS 180
           GTFVINP+G IK +E+H N I RD SE LRK+KAAQY A+HP EVCPAKW+EG  TL PS
Sbjct: 121 GTFVINPDGVIKTLEIHSNEIARDVSETLRKLKAAQYTAAHPNEVCPAKWKEGEKTLAPS 180

Query: 181 LDLVGKI 187
           LDLVGKI
Sbjct: 181 LDLVGKI 187


>gi|152981345|ref|YP_001355069.1| antioxidant protein LsfA
           [Janthinobacterium sp. Marseille]
          Length = 212

 Score = 70.5 bits (171), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 45/151 (29%), Positives = 72/151 (47%), Gaps = 5/151 (3%)

Query: 33  WSVFVFYPADFTFVCPTELEDLADNYAEFKKLGVEIYGVSTDTHFAHKAWHDTSEAIKK- 91
           W V   +PADFT VC TEL   A    EF K  V+   +S D    H  W    EA +K 
Sbjct: 31  WVVLFSHPADFTPVCTTELGLTAKLKPEFDKRNVKAIALSVDPAEKHVEWIKDIEATQKT 90

Query: 92  -VQYPLVGDPTATLARNFEVLIEEEG--LALRGTFVINPEGEIKVMEVHDNGIGRDASEL 148
            V +P+V D   +++  ++++   +     +R  FVI+P+ +I++   +    GR+  E+
Sbjct: 91  VVGFPIVADADKSVSTLYDMIHPNQSATATVRSLFVIDPQKKIRLTITYPMSTGRNFDEV 150

Query: 149 LRKVKAAQYVASHPGEVCPAKWEEGAATLKP 179
           LR + A Q    +     P  W +G   + P
Sbjct: 151 LRVIDALQLTDGY-TVATPGNWRDGDDVIIP 180


>gi|152981397|ref|YP_001352999.1| bacterioferritin comigratory
           protein [Janthinobacterium sp. Marseille]
          Length = 164

 Score = 58.2 bits (139), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 43/136 (31%), Positives = 67/136 (49%), Gaps = 13/136 (9%)

Query: 2   SLINTTIKPFKATAYHDGKFVDITEATLKGKWSVFVFYPADFTFVCPTELEDLADNYAEF 61
           S +N  +  F A    +  F     A  KGK  V  FYP D T  C TE     D +A+F
Sbjct: 12  SALNKIVPDFSAAMTGEQTF---QLADYKGKKIVLYFYPKDNTPGCTTEGIQFRDLHAQF 68

Query: 62  KKLGVEIYGVSTDTHFAHKAWHDTSEAIKKVQYPLVGDPTATLARNFEVLIEEE--GLAL 119
           ++   EI+GVS D+  +H+ +    +A   + + L+ DP  TL   F+V+  +   G  +
Sbjct: 69  QQANAEIFGVSRDSLRSHEGF----KAKLDLPFELISDPDETLCTMFDVMKMKNMYGKKV 124

Query: 120 RG----TFVINPEGEI 131
           RG    TF+I+  G++
Sbjct: 125 RGIERSTFIIDESGKL 140


  Database: BlastDatabases/707/707
    Posted date:  Apr 13, 2011 12:58 PM
  Number of letters in database: 1,221,021
  Number of sequences in database:  3697
  
Lambda     K      H
   0.317    0.135    0.404 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 3697
Number of Hits to DB: 450,097
Number of extensions: 17946
Number of successful extensions: 54
Number of sequences better than 1.0e-08: 3
Number of HSP's gapped: 52
Number of HSP's successfully gapped: 3
Length of query: 187
Length of database: 1,221,021
Length adjustment: 78
Effective length of query: 109
Effective length of database: 932,655
Effective search space: 101659395
Effective search space used: 101659395
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 127 (53.5 bits)