BLASTP 2.2.18 [Mar-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0001.4156.p
         (297 letters)

Database: BlastDatabases/707/707 
           3697 sequences; 1,221,021 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|152980150|ref|YP_001354925.1| acetylglutamate kinase [Janthin...   564   e-162
gi|152980008|ref|YP_001352869.1| N-acetylglutamate synthase [Jan...   103   1e-23

>gi|152980150|ref|YP_001354925.1| acetylglutamate kinase
           [Janthinobacterium sp. Marseille]
          Length = 297

 Score =  564 bits (1454), Expect = e-162,   Method: Compositional matrix adjust.
 Identities = 280/297 (94%), Positives = 287/297 (96%)

Query: 1   MTTDLTHVAPQIKAEILAEALPYIRKFHGKTIVVKYGGNAMTEESLKHGFARDVILLKLV 60
           M  DLT V+PQI+A+ILAEALPYIRKFHGKTIVVKYGGNAMTEE LKHGFARDVILLKLV
Sbjct: 1   MNADLTVVSPQIQAQILAEALPYIRKFHGKTIVVKYGGNAMTEERLKHGFARDVILLKLV 60

Query: 61  GMNPVVVHGGGPQIDAALKKIGKQGTFVQGMRITDEETMEVVEWVLGGEVQQDIVMLINH 120
           GMNPVVVHGGGPQID ALKKIGKQGTFVQGMRITDEETMEVVEWVLGGEVQQDIVMLINH
Sbjct: 61  GMNPVVVHGGGPQIDNALKKIGKQGTFVQGMRITDEETMEVVEWVLGGEVQQDIVMLINH 120

Query: 121 YGGQAVGLTGKDGGLIRARKMQMPDKEHPGAYLDIGYVGEIEAINPAVVKALQDDAFIPI 180
           YGGQAVGLTGKDGGLIRA+KMQMPDKEHPG +LDIG+VG+IEAINPAVVKALQDDAFIPI
Sbjct: 121 YGGQAVGLTGKDGGLIRAKKMQMPDKEHPGQFLDIGFVGDIEAINPAVVKALQDDAFIPI 180

Query: 181 ISPIGFGDDGQAYNINADVVAGKIAEILHAEKLIMMTNIAGVQDKAGKLLTDLSAREIDE 240
           ISPIGFGDDGQAYNINADVVAGKIAEIL AEKLIMMTNIAGVQDK G LLTDLSAREIDE
Sbjct: 181 ISPIGFGDDGQAYNINADVVAGKIAEILKAEKLIMMTNIAGVQDKQGNLLTDLSAREIDE 240

Query: 241 MFADGTISGGMLPKISSALDAAKSGVNTVHIIDGRIEHSLLLEVLTEQAFGTMIRSH 297
           MF DGTISGGMLPKISSALDAAKSGVNTVHIIDGRIEHSLLLEVLTEQAFGTMIRSH
Sbjct: 241 MFEDGTISGGMLPKISSALDAAKSGVNTVHIIDGRIEHSLLLEVLTEQAFGTMIRSH 297


>gi|152980008|ref|YP_001352869.1| N-acetylglutamate synthase
           [Janthinobacterium sp. Marseille]
          Length = 436

 Score =  103 bits (256), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 83/289 (28%), Positives = 134/289 (46%), Gaps = 22/289 (7%)

Query: 15  EILAEALPYIRKFHGKTIVVKYGGNAMTEESLKHGFARDVILLKLVGMNPVVVHGGGPQI 74
           + L    PYI  F GKT VV + G  +   +L    A+D+ LL  +G+  V+VHG  PQ+
Sbjct: 9   QWLRSVAPYIHAFRGKTFVVAFPGELVKAGALP-VLAQDLSLLHALGIRVVIVHGSRPQV 67

Query: 75  DAALKKIGKQGTFVQGMRITDEETMEVVEWVLGGEVQQDIVMLINH------YGGQAVGL 128
           +  L     +  F  G+RITD   +E  +    GE++ DI    +           A+ +
Sbjct: 68  EEQLALRHVEARFHDGVRITDTAALECAKEA-AGELRLDIEAAFSQGLPNTPMAHAAIRI 126

Query: 129 TGKDGGLIRARKMQM---PDKEHPGAYLDIGYVGEIEAINPAVVKALQDDAFIPIISPIG 185
               G  + AR + +    D E  G    I Y    EAI+P     + +   + ++SP+G
Sbjct: 127 IS--GNFVTARPVGIIDGVDLELTGVTRKIAY----EAIHP-----ILNAGGLVLLSPLG 175

Query: 186 FGDDGQAYNINADVVAGKIAEILHAEKLIMMTNIAGVQDKAGKLLTDLSAREIDEMFADG 245
           F   G+ +N+  + VA   A  L A+KLI +T    ++D AG  + +LS+ ++D +    
Sbjct: 176 FSPTGEIFNLTMEDVAVNAAVALRADKLIFITETPMIKDMAGADIHELSSHQVDAVLQHD 235

Query: 246 TISGGMLPKISSALDAAKSGVNTVHIIDGRIEHSLLLEVLTEQAFGTMI 294
            +       +  A+ A   GV   HI+    + S LLE+ T    GTM+
Sbjct: 236 CVPADAAFYLQHAMQACNGGVPRAHIVPFATDGSALLELFTHDGVGTMV 284


  Database: BlastDatabases/707/707
    Posted date:  Apr 13, 2011 12:58 PM
  Number of letters in database: 1,221,021
  Number of sequences in database:  3697
  
Lambda     K      H
   0.318    0.138    0.391 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 3697
Number of Hits to DB: 755,374
Number of extensions: 33973
Number of successful extensions: 108
Number of sequences better than 1.0e-08: 2
Number of HSP's gapped: 106
Number of HSP's successfully gapped: 2
Length of query: 297
Length of database: 1,221,021
Length adjustment: 83
Effective length of query: 214
Effective length of database: 914,170
Effective search space: 195632380
Effective search space used: 195632380
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 129 (54.3 bits)