BLASTP 2.2.18 [Mar-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0001.4146.p
         (281 letters)

Database: BlastDatabases/707/707 
           3697 sequences; 1,221,021 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|152980574|ref|YP_001354889.1| lipid A biosynthesis lauroyl ac...   391   e-110
gi|152979822|ref|YP_001354890.1| lipid A biosynthesis lauroyl ac...    93   1e-20

>gi|152980574|ref|YP_001354889.1| lipid A biosynthesis lauroyl
           acyltransferase [Janthinobacterium sp. Marseille]
          Length = 289

 Score =  391 bits (1005), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 195/280 (69%), Positives = 221/280 (78%)

Query: 1   MLVSLFRLLSFLPLPALHAIGVAVGWLVFLLSPAYRRRLTDNITLAGHRSSLLKAVGEAG 60
           MLV LFRLLSFLPLP LHAIGVA+GW V+L S +YRRRL +NI LAG    L KAVGE+G
Sbjct: 1   MLVFLFRLLSFLPLPILHAIGVAIGWTVYLASGSYRRRLKENINLAGFGQHLYKAVGESG 60

Query: 61  KGMFELPFIWCANPKRVLRTARIVNWELVQQALDAKAGIVFLTPHLGCFEISAQSVARHS 120
           K M ELPFIWCA+P+RVLR+ RI NWE+V+QA  A  GI+FLTPHLGCFEISAQ  A   
Sbjct: 61  KNMLELPFIWCASPERVLRSIRIENWEVVEQAAAAGKGIIFLTPHLGCFEISAQVAAAQL 120

Query: 121 SLSVLYRPPRKAALKPLIEGARARANLHLAPANLAGVRILLKALKNGQAIGLLPDQVPQN 180
            ++VLYRPPR+ ALKPLIEGARAR NL LAPANL+GVR L K LK   AIGLLPDQVPQN
Sbjct: 121 PITVLYRPPRQEALKPLIEGARARHNLSLAPANLSGVRTLFKVLKRNGAIGLLPDQVPQN 180

Query: 181 GEGVWADFFGKPAYTMTLPAKLQQMSGAPIILAYAERLSWGRGYAIHFVPFEGELGDTPE 240
           GEGVWADFFGKPAYTMTLPAK+ +M+GA +ILA+AER  +G+GY +H   F    G   E
Sbjct: 181 GEGVWADFFGKPAYTMTLPAKMLEMTGAAMILAFAERRPYGKGYVLHLRQFNIPEGLPLE 240

Query: 241 QQARAINSAMEKLIARCPAQYIWSYNRYKTPRGVTPPGAA 280
            Q RAIN+AME+LIA CPAQY WSYN YK P GV+ P AA
Sbjct: 241 AQVRAINAAMEELIALCPAQYFWSYNHYKIPAGVSAPHAA 280


>gi|152979822|ref|YP_001354890.1| lipid A biosynthesis lauroyl
           acyltransferase [Janthinobacterium sp. Marseille]
          Length = 299

 Score = 93.2 bits (230), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 75/290 (25%), Positives = 131/290 (45%), Gaps = 22/290 (7%)

Query: 1   MLVSLFRLLSFLPLPALHAIGVAVGWLVFLLSPAYRRRLTDNITLA------GHRSSLLK 54
            +++L   L +LPLP +  +G  +G L+F+   + RR    N+ L         R ++ K
Sbjct: 3   FIIALMWCLHWLPLPVIARLGEVIGSLLFIYKKSRRRITLINLALCFPELPEEERQAIAK 62

Query: 55  AVGEA-GKGMFELPFIWCANPKRVLRTARIVNWELVQQALDAKAGIVFLTPHLGCFEISA 113
              +A  + + E   +W  +  R LR   +V   +   A+ A   I+ L PH    +++ 
Sbjct: 63  KHFQAYARSVLERGILWWGSEAR-LRRLIVVEPGVPLDAIKASPTIL-LCPHFVSLDVAG 120

Query: 114 QSVARHSSLSVLYRPPRKAALKPLIEGARARANLHLAPANL----AGVRILLKALKNGQA 169
            +V   SSL  +Y       L P+ +    +      P  L     G++ +++A++    
Sbjct: 121 VAVMLESSLCSIY----TQQLNPVFDEVLRKGRSRFRPVKLFSRSDGIKPIIRAMREHLP 176

Query: 170 IGLLPDQVPQNGEGVWADFFGKPAYTMTLPAKLQQMSGAPIILAYAERLSWGRGYAIHFV 229
             +LPD      +  +  FFG PA T+T PA++   + A +I   A  L   RG+ + F 
Sbjct: 177 FFMLPDMDFGEKDAEFVPFFGIPAATLTAPARIAAATNAKVIPVVATYLPGYRGWKVTFY 236

Query: 230 P-FEGELGDTPEQQARAINSAMEKLIARCPAQYIWSYNRYKTPRGVTPPG 278
           P +E   GD      R +N+ +E      P++Y W++ R+KT     PPG
Sbjct: 237 PAWENYPGDDITAATRYMNAFIEARARETPSEYFWTHKRFKT----RPPG 282


  Database: BlastDatabases/707/707
    Posted date:  Apr 13, 2011 12:58 PM
  Number of letters in database: 1,221,021
  Number of sequences in database:  3697
  
Lambda     K      H
   0.323    0.138    0.426 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 3697
Number of Hits to DB: 678,071
Number of extensions: 28448
Number of successful extensions: 68
Number of sequences better than 1.0e-08: 2
Number of HSP's gapped: 66
Number of HSP's successfully gapped: 2
Length of query: 281
Length of database: 1,221,021
Length adjustment: 82
Effective length of query: 199
Effective length of database: 917,867
Effective search space: 182655533
Effective search space used: 182655533
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 129 (54.3 bits)