BLASTP 2.2.18 [Mar-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0001.4142.p
         (280 letters)

Database: BlastDatabases/707/707 
           3697 sequences; 1,221,021 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|152979823|ref|YP_001354884.1| 5,10-methylenetetrahydrofolate ...   471   e-134

>gi|152979823|ref|YP_001354884.1| 5,10-methylenetetrahydrofolate
           reductase (FADH2) [Janthinobacterium sp. Marseille]
          Length = 283

 Score =  471 bits (1213), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 220/278 (79%), Positives = 245/278 (88%)

Query: 1   MSTPNFSIEFFPPKTAEGAEKLRATRAKLAALQPKYFSVTFGAGGSTQQGTRDTVLEIVG 60
           M   NFSIEFFPPKT  G EKLR T AKLA L PKYFSVTFGAGGSTQQGT +TVLEI G
Sbjct: 1   MKDQNFSIEFFPPKTPAGVEKLRVTCAKLAELNPKYFSVTFGAGGSTQQGTLETVLEIRG 60

Query: 61  EGHEAAPHLSCIGSSRASLRAILEDYRANGIKRLVALRGDLPSGYGAMDQASSEFRYANE 120
            G +AAPHLSC+GSSR SLRAIL +Y+++GIKR+VALRGDLPSGYGAMD +SSEF +ANE
Sbjct: 61  AGQDAAPHLSCLGSSRDSLRAILAEYKSHGIKRIVALRGDLPSGYGAMDMSSSEFHHANE 120

Query: 121 LVEFVRAETGDWFHIEVAAYPEMHPQARSPQDDVQNFARKVKAGANSAITQYFYNADAYF 180
           LVEF+RAETGDWFHIEVAAYPEMHPQA+SPQDD+ +F RK KAGA+SAITQYFYNADAYF
Sbjct: 121 LVEFIRAETGDWFHIEVAAYPEMHPQAKSPQDDIASFVRKAKAGADSAITQYFYNADAYF 180

Query: 181 RFVDEAARLGANVPVIAGIMPITNYSQLVRFSDMCGTEIPRWIRLKLASYADDTESIRAF 240
           RFVD+A + G ++PV AGIMPITNYSQL+RFSDMCG EIPRWIRLKLAS+ DD+ESIRAF
Sbjct: 181 RFVDDARKAGTDIPVTAGIMPITNYSQLMRFSDMCGAEIPRWIRLKLASFGDDSESIRAF 240

Query: 241 GLEVVTQLCERLLAGGAPGLHFYSLNQAGPTQAIWQQL 278
           GL+VVT LCERLLAGGAPGLHFY+LNQA  T  IW +L
Sbjct: 241 GLDVVTDLCERLLAGGAPGLHFYTLNQAVATHTIWTRL 278


  Database: BlastDatabases/707/707
    Posted date:  Apr 13, 2011 12:58 PM
  Number of letters in database: 1,221,021
  Number of sequences in database:  3697
  
Lambda     K      H
   0.320    0.134    0.396 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 3697
Number of Hits to DB: 640,425
Number of extensions: 24484
Number of successful extensions: 54
Number of sequences better than 1.0e-08: 1
Number of HSP's gapped: 54
Number of HSP's successfully gapped: 1
Length of query: 280
Length of database: 1,221,021
Length adjustment: 82
Effective length of query: 198
Effective length of database: 917,867
Effective search space: 181737666
Effective search space used: 181737666
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 129 (54.3 bits)