BLASTP 2.2.18 [Mar-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0001.4141.p
         (210 letters)

Database: BlastDatabases/707/707 
           3697 sequences; 1,221,021 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|152981771|ref|YP_001354883.1| 5-formyltetrahydrofolate cyclo-...   191   3e-50

>gi|152981771|ref|YP_001354883.1| 5-formyltetrahydrofolate
           cyclo-ligase [Janthinobacterium sp. Marseille]
          Length = 227

 Score =  191 bits (484), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 97/194 (50%), Positives = 125/194 (64%), Gaps = 6/194 (3%)

Query: 15  PSIARDTLAPDTETTRAAHHKTLLRKILLARRKAMQAEDQARAAALIGQRVLHWCAHQAI 74
           P IARD             +K  LR+ LL  RKA+ A+ +A     +  ++L W   +  
Sbjct: 33  PRIARDY------PPVPMQNKLELRRTLLTSRKALAADQRAIFDRRLSDKILQWWRAEKP 86

Query: 75  ASLAVYQAIRGEPDLSAAYNALAAQGVHLCLPVVVGQEAPLEFRAWQPGDVLEKDALGTL 134
           ASL VY A+RGEPD+  AY  LAA GV L LP++VG  APL+F +W PG+ L KD  GT 
Sbjct: 87  ASLGVYWAMRGEPDVHQAYAELAAAGVQLALPLIVGDNAPLQFVSWTPGEALRKDRFGTD 146

Query: 135 VPPAGAPIVQPQALLIPCLGFNAAGFRLGYGGGFYDRTLAVNPRPLAVGVCHGFGLVEFE 194
           +P A   ++QPQALLIPCLGFNA  FRLGYGGGFYDRTLA  PRP  +GV +  G V+F 
Sbjct: 147 IPAADNALIQPQALLIPCLGFNADCFRLGYGGGFYDRTLAQEPRPRTLGVAYALGEVDFS 206

Query: 195 AQTHDIALDDILTD 208
           A+ +D+ALD ++T+
Sbjct: 207 AEVYDVALDAVVTE 220


  Database: BlastDatabases/707/707
    Posted date:  Apr 13, 2011 12:58 PM
  Number of letters in database: 1,221,021
  Number of sequences in database:  3697
  
Lambda     K      H
   0.323    0.136    0.414 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 3697
Number of Hits to DB: 436,136
Number of extensions: 17338
Number of successful extensions: 49
Number of sequences better than 1.0e-08: 1
Number of HSP's gapped: 49
Number of HSP's successfully gapped: 1
Length of query: 210
Length of database: 1,221,021
Length adjustment: 79
Effective length of query: 131
Effective length of database: 928,958
Effective search space: 121693498
Effective search space used: 121693498
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 127 (53.5 bits)