BLASTP 2.2.18 [Mar-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0001.4126.p
         (261 letters)

Database: BlastDatabases/707/707 
           3697 sequences; 1,221,021 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|152980736|ref|YP_001352865.1| septum site-determining protein...   304   3e-84

>gi|152980736|ref|YP_001352865.1| septum site-determining protein
           MinC [Janthinobacterium sp. Marseille]
          Length = 263

 Score =  304 bits (779), Expect = 3e-84,   Method: Compositional matrix adjust.
 Identities = 158/258 (61%), Positives = 194/258 (75%), Gaps = 1/258 (0%)

Query: 4   TRKPIEIKISTVVAISAILHETDPTSLEKALKEMTGGVADFFEDEFAVLDVGTLDAAAAA 63
           +RKPIEIKISTVVA+SAIL + +   L+ A++EMTGG ADFF+DEFAV+DVG+L+ A   
Sbjct: 6   SRKPIEIKISTVVAVSAILRDANLAVLDAAMQEMTGGNADFFDDEFAVIDVGSLEPAGQV 65

Query: 64  AIDWTAVVALFKRFRLNTVAVRNAPEELHSGIVSHGLAIDTSAVAGAGAANARAQEAAAQ 123
            IDW A+ AL K +RLN VAVRNA  E+ + +++HGL++D S    A +     Q+A  +
Sbjct: 66  -IDWAAITALLKSYRLNAVAVRNATPEMAAEVLAHGLSLDGSIKERAPSTANTPQQAEIE 124

Query: 124 EATPAAAPAPAPQAVQAAATAPAAPAAKTIIVDTPVRAGQRIYARGADLVVLAVVNNGAE 183
            A  A  P P P AVQ AA      AA T+IVDTPVRAGQRIYARGADL++ A VNNGAE
Sbjct: 125 LAPVAVEPTPEPVAVQVAAPVTTQFAANTMIVDTPVRAGQRIYARGADLIITAAVNNGAE 184

Query: 184 LIADGCIHVYAPLRGRALAGASGNTEARIFAASLEAELVSIAGVYRTFENGHAPELAGKQ 243
           +IADG IH+YAPLRGRALAGASGNTEARIF  S+EAELVSIAG+YRTFENG   + A + 
Sbjct: 185 VIADGSIHIYAPLRGRALAGASGNTEARIFTLSMEAELVSIAGMYRTFENGFPQDRAQQA 244

Query: 244 VQVRLQGERIDVLPMSAS 261
            QVRL G+RID+LP+ A+
Sbjct: 245 TQVRLVGDRIDMLPIKAA 262


  Database: BlastDatabases/707/707
    Posted date:  Apr 13, 2011 12:58 PM
  Number of letters in database: 1,221,021
  Number of sequences in database:  3697
  
Lambda     K      H
   0.316    0.128    0.353 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 3697
Number of Hits to DB: 425,299
Number of extensions: 13328
Number of successful extensions: 71
Number of sequences better than 1.0e-08: 1
Number of HSP's gapped: 70
Number of HSP's successfully gapped: 1
Length of query: 261
Length of database: 1,221,021
Length adjustment: 81
Effective length of query: 180
Effective length of database: 921,564
Effective search space: 165881520
Effective search space used: 165881520
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 128 (53.9 bits)