BLASTP 2.2.18 [Mar-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0001.4079.p
         (279 letters)

Database: BlastDatabases/707/707 
           3697 sequences; 1,221,021 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|152980167|ref|YP_001353754.1| UTP--glucose-1-phosphate uridyl...   291   3e-80
gi|152979925|ref|YP_001352335.1| mannose-1-phosphate guanylyltra...    70   1e-13

>gi|152980167|ref|YP_001353754.1| UTP--glucose-1-phosphate
           uridylyltransferase [Janthinobacterium sp. Marseille]
          Length = 291

 Score =  291 bits (745), Expect = 3e-80,   Method: Compositional matrix adjust.
 Identities = 141/276 (51%), Positives = 197/276 (71%), Gaps = 4/276 (1%)

Query: 1   MKPLRKAIFPVAGLGTRLLPATKSIPKEMLTIVDRPLIHYAVSEAIEAGIEVLIFVTSRG 60
           M  +RKA+FPVAGLG+R LPATK+ PKEML +VD+PLI YAV EA+ AGI  ++F+T R 
Sbjct: 1   MSKIRKAVFPVAGLGSRFLPATKAQPKEMLPVVDKPLIQYAVEEAVAAGITDMVFITGRN 60

Query: 61  KRAIADYFDYHPELEAELQAKGKLEVLASVRNIIPPHVSCVFIHQARPLGLGHAVLCAAE 120
           KRAI D+FD   ELEAEL+A  K  +L  VRN+IP +++C++I Q+ PLGLGHAVLCA  
Sbjct: 61  KRAIEDHFDTAYELEAELEAANKNALLELVRNVIPKNINCIYIRQSAPLGLGHAVLCARP 120

Query: 121 MIDDEPFAVLLPDDLIDGTSQG---ALAQLAQLHRQTSASVLAIEEVPRDKVHQYGIIAS 177
           +I ++PFAVLL DD +D T +G    LAQ+  + ++   S+LA+++VPR +  QYGI+++
Sbjct: 121 VIGNDPFAVLLADDFMD-TDEGVKPVLAQMTDVFQREGHSILAVQDVPRAETKQYGIVSA 179

Query: 178 STSQAGAAVIDAIVEKPSPATAPSNWSVVGRYILPPQVMRALATQAPSVGGEIQLTDAIA 237
           +  Q    +++AIVEKP P  APS  +VVGRY+L  ++   L T     GGEIQLTD IA
Sbjct: 180 TAYQPQLELVNAIVEKPQPDVAPSTLAVVGRYVLSNKIFDYLETIGKGAGGEIQLTDGIA 239

Query: 238 SCLPAEKFLGHPLHGRRFDCGNKEGFIEANLHFSLK 273
           + + AEK L +  +G+R+DCG+K G+++A +   LK
Sbjct: 240 ALMQAEKVLAYRYNGQRYDCGSKLGYLKAMVAMGLK 275


>gi|152979925|ref|YP_001352335.1| mannose-1-phosphate
           guanylyltransferase [Janthinobacterium sp. Marseille]
          Length = 385

 Score = 70.5 bits (171), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 63/214 (29%), Positives = 97/214 (45%), Gaps = 23/214 (10%)

Query: 6   KAIFPVAGLGTRLLPATKSIPKEMLTIVDRPLIHYAVSEAIEAGIEVLIFVTSRGKRAIA 65
           KA+   AG GTR+ P T  +PK M+ I+ +P++ Y V   ++ GI  ++   S   + I 
Sbjct: 2   KAMILAAGKGTRVQPLTYELPKPMIPILGKPVMEYLVEHLVKYGIHEIMVNVSYLHQKIE 61

Query: 66  DYFDYHPELEAELQAKGKLEVLASVRNIIPPHVSCVFIHQARPLGLGHAVLCAAEM--ID 123
           DYF       A++      E   +    + P          +P+G    +    E     
Sbjct: 62  DYFGEGQRFGAQIGY--SFEGYMTDEGEVMP----------KPIGSAGGLKKIQEFGGFF 109

Query: 124 DEPFAVLLPDDLIDGTSQGALAQLAQLHRQTSASVLAI-EEVPRDKVHQYGIIASSTSQA 182
           DE   V+  D LID   + AL +    HR+  A V  I +EVP +K   YG++   T + 
Sbjct: 110 DETTLVICGDALIDLDIKSALFE----HRRKGAMVSIITKEVPLEKASDYGMVV--TDEE 163

Query: 183 GAAVIDAIVEKPSPATAPSNWSVVGRYILPPQVM 216
           G  +  +  EKP P  A SN +  G YI  P+V+
Sbjct: 164 GRVL--SFQEKPKPEDALSNLASTGIYIFEPEVL 195


  Database: BlastDatabases/707/707
    Posted date:  Apr 13, 2011 12:58 PM
  Number of letters in database: 1,221,021
  Number of sequences in database:  3697
  
Lambda     K      H
   0.320    0.135    0.393 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 3697
Number of Hits to DB: 652,492
Number of extensions: 26968
Number of successful extensions: 85
Number of sequences better than 1.0e-08: 2
Number of HSP's gapped: 83
Number of HSP's successfully gapped: 2
Length of query: 279
Length of database: 1,221,021
Length adjustment: 82
Effective length of query: 197
Effective length of database: 917,867
Effective search space: 180819799
Effective search space used: 180819799
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 129 (54.3 bits)