BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0001.4071.p (2537 letters) Database: BlastDatabases/707/707 3697 sequences; 1,221,021 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gi|152980998|ref|YP_001352241.1| NADPH2:quinone reductase [Janth... 126 2e-29 gi|152981242|ref|YP_001352077.1| NADPH2:quinone reductase [Janth... 124 1e-28 gi|152983071|ref|YP_001352710.1| 3-oxoacyl-acyl carrier protein ... 119 3e-27 gi|152979820|ref|YP_001353050.1| 3-oxoacyl-[acyl-carrier-protein... 116 2e-26 gi|152983044|ref|YP_001352609.1| 3-oxoacyl-(acyl-carrier-protein... 106 1e-23 >gi|152980998|ref|YP_001352241.1| NADPH2:quinone reductase [Janthinobacterium sp. Marseille] Length = 324 Score = 126 bits (317), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 77/218 (35%), Positives = 108/218 (49%), Gaps = 8/218 (3%) Query: 1808 GPEEVEVAVQATGLNFRDIMYLMGLLPDEAVEAGFGGASLGLEFSGVVSRVGRSVTAFEP 1867 GP E + A GLN+ D+ + MG P + A LG+E +GVV VG VT P Sbjct: 27 GPGEALIWQHACGLNYIDVYFRMGTYPQQLP------AGLGMEGAGVVEAVGAGVTHIRP 80 Query: 1868 GDKVIGFGS--ACFASHVVTRCEALALMPGQWSFEAAATVPTVFFTTYYALKELANLQPG 1925 GD+V G +A V + L +P SFE AA + T Y + LQ G Sbjct: 81 GDRVAYAGRPPGAYAEARVLPADVLVKLPEAISFETAAAMMLQGLTVQYLFRRTFRLQGG 140 Query: 1926 ERVLIHGAAGGIGLAAIQLAKLLGAEIFATAGSEEKRDFVRLLGVDHVFDSRNLDYVERI 1985 E +L H AAGG+GL A Q A+ LG + T GS+EK + + G H + ++VER+ Sbjct: 141 ETILFHAAAGGVGLIACQWARALGVTMIGTVGSDEKAELAKAHGCVHTINYNKENFVERV 200 Query: 1986 MEHTSGQGVDVILNSLAGEAIRRNLSVLKPFGRFLELG 2023 E T G+GV V+ +S+ + +L L P G + G Sbjct: 201 KEITGGKGVPVVYDSIGKDTFTGSLDCLSPLGMLVSFG 238 >gi|152981242|ref|YP_001352077.1| NADPH2:quinone reductase [Janthinobacterium sp. Marseille] Length = 325 Score = 124 bits (310), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 99/328 (30%), Positives = 160/328 (48%), Gaps = 22/328 (6%) Query: 1791 PGQLRNLAWRPNPTTDMGPEEVEVAVQATGLNFRDIMYLMGLLPDEAVEAGFGGASL-GL 1849 P + L RP P G EV + V A G+N D++ G P G + L GL Sbjct: 11 PPDVLKLCERPMPEPKAG--EVLIKVHAAGINRPDVLQRTGNYPVPK-----GASDLPGL 63 Query: 1850 EFSGVVSRVGRSVTAFEPGDKVI----GFGSACFASHVVTRCEALALMPGQWSFEAAATV 1905 E +G + + + F+ GD + G G A + + V +C L + G + EAA ++ Sbjct: 64 EVAGEIVGGDLTGSGFKIGDMICALAQGGGYAEYCTAPVEQC--LPIPKGLDAVEAA-SL 120 Query: 1906 PTVFFTTYYALKELANLQPGERVLIHGAAGGIGLAAIQLAKLLGAEIFATAGSEEKRDFV 1965 P FFT + + + L E +L+ G GIG+ AIQ+A LG +FATAGS++K Sbjct: 121 PETFFTVWSNVFDRVGLTGDETLLVQGGTSGIGVTAIQIATALGHRVFATAGSDDKARAC 180 Query: 1966 RLLGVDHVFDSRNLDYVERIMEHTSGQGVDVILNSLAGEAIRRNLSVLKPFGR--FLEL- 2022 ++G + + + D+VE + T G+GVDVIL+ + G+ + R + L GR F+ L Sbjct: 181 EVMGAERGINYKTEDFVEIVKAATGGKGVDVILDMVGGDYVPREIRCLADDGRLVFIALL 240 Query: 2023 -GKRDFFENTRIGLRPFKDNISYFGIDADQLLTRRPDLAARLLKEVMALFQDGHLFPLPY 2081 G + +I LR S + + + +A +L + V L + G + P+ Y Sbjct: 241 GGNKAEVSLGQILLRRLTITGSTL---RPRPVAFKAAIAKQLRERVWPLIEAGKIKPVIY 297 Query: 2082 RAFPAERVEEAFRFMQQAKHIGKVVVSL 2109 + FP E +A M+ + HIGK+++ L Sbjct: 298 QTFPLEEAAQAHALMESSTHIGKIILKL 325 >gi|152983071|ref|YP_001352710.1| 3-oxoacyl-acyl carrier protein synthase II [Janthinobacterium sp. Marseille] Length = 437 Score = 119 bits (297), Expect = 3e-27, Method: Compositional matrix adjust. Identities = 97/294 (32%), Positives = 146/294 (49%), Gaps = 17/294 (5%) Query: 165 LSAHTMTGNTLSLAANRLSYFFDLRGPSLAVDTACSSSLFALHHACRCLQHGEAKVALVG 224 LS T+ ++LAA +S + +GP A TAC++S+ A+ A R +++GEA VAL G Sbjct: 152 LSPFTIPSFLINLAAGHVSIKYGFKGPIAAPVTACAASVQAIGDAARMIRNGEADVALCG 211 Query: 225 GVNLLLHPYPFVGFTKASMLSA---DGRC---KVFDAAGNGYVRAEGGAVLLLKPLRQAQ 278 G + GF+ A LS D C + FD A +G+V EG +L+L+ L A Sbjct: 212 GAEAAIDRVSLGGFSAARALSTNFNDEPCAASRPFDQARDGFVMGEGAGILVLEDLDHAL 271 Query: 279 RDGDCIHAVILASGINSDGKRKT-GITIPSQAGQAELMRSVLKQSGLRGADIDFIEAHGT 337 G A ++ G +D T G T S G A M L+Q+G+ AD+ + AH T Sbjct: 272 ARGAKPIAELIGYGTTADAYHITAGPTDGS--GAARAMAIALEQAGITAADVQHLNAHAT 329 Query: 338 GTMVGDPVEAAAIGEVYGGQRAAPLPIGSIKANLGHLEAASGMASLVKTVLALKRRALPP 397 T VGD E AAI V+G + + + S K+ GHL A+G + +LAL+ + +P Sbjct: 330 STPVGDAGELAAIKAVFGTSNS--IAVTSTKSATGHLLGAAGGVEAIFAILALRDQIVPA 387 Query: 398 QIQLHEPHPSIDLEALNLRCHTSPFPLSKEGPLLAGVNSFGFGGANAHVLLREY 451 + L ID +++ + + E + N FGFGG NA VL + + Sbjct: 388 TLNLET--KDIDATGVDI-VNGIARNMDIEHAM---SNGFGFGGVNASVLFKRW 435 >gi|152979820|ref|YP_001353050.1| 3-oxoacyl-[acyl-carrier-protein] synthase II [Janthinobacterium sp. Marseille] Length = 413 Score = 116 bits (291), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 85/280 (30%), Positives = 140/280 (50%), Gaps = 18/280 (6%) Query: 175 LSLAANRLSYFFDLRGPSLAVDTACSSSLFALHHACRCLQHGEAKVALVGGVNLLLHPYP 234 +++ + LS + L+GP+LA+ TAC++ L ++ A R +++G+A V + GG + P Sbjct: 143 INMISGHLSIIYGLKGPNLAIVTACTTGLHSIGAAGRMIEYGDADVMIAGGAESTISPLG 202 Query: 235 FVGFTKASMLSADGR-----CKVFDAAGNGYVRAEGGAVLLLKPLRQAQRDGDCIHAVIL 289 GF A LS+ + +D +G+V EG V++L+ A+ G I+A ++ Sbjct: 203 LGGFASARALSSRNDDPATASRPWDKDRDGFVLGEGAGVMVLEEYEHAKARGAKIYAELV 262 Query: 290 ASGINSDGKRKTGITIPSQAGQAELMRSVLKQSGLRGADIDFIEAHGTGTMVGDPVEAAA 349 G++ D IT P+ G M + LK + + + ++ AHGT T +GD E A Sbjct: 263 GFGMSGDAYH---ITAPNMDGPRRSMTNALKSAEIAADQVQYLNAHGTSTPLGDKNETDA 319 Query: 350 IGEVYGGQRAAPLPIGSIKANLGHLEAASGMASLVKTVLALKRRALPPQIQLHEPHPSID 409 + +G A L + S K+ GHL +G V TVLAL + PP I + P D Sbjct: 320 VKAAFGAH-AKKLTVNSTKSMTGHLLGGAGGLESVFTVLALHHQISPPTINIFNQDPECD 378 Query: 410 LEALNLRCHTSPFPLSKEGPL-LAGVNSFGFGGANAHVLL 448 L+ C + ++E P+ A N+FGFGG N ++ Sbjct: 379 LD----YCANN----AREIPIQYAMKNNFGFGGTNGTLIF 410 >gi|152983044|ref|YP_001352609.1| 3-oxoacyl-(acyl-carrier-protein) synthase II [Janthinobacterium sp. Marseille] Length = 438 Score = 106 bits (265), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 92/294 (31%), Positives = 137/294 (46%), Gaps = 17/294 (5%) Query: 165 LSAHTMTGNTLSLAANRLSYFFDLRGPSLAVDTACSSSLFALHHACRCLQHGEAKVALVG 224 LS T+ ++LAA +S +GP A TAC++S+ A+ A R +++ EA V L G Sbjct: 152 LSPFTIPSFLINLAAGHISIKHGFKGPIAAPVTACAASVQAIGDAARMIRNEEADVVLCG 211 Query: 225 GVNLLLHPYPFVGFTKASMLSADGR------CKVFDAAGNGYVRAEGGAVLLLKPLRQAQ 278 G + GF A LS + + FD +G+V EG +L+L+ L A Sbjct: 212 GAEAAIDRVSLGGFAAARALSTNFNDDPTTASRPFDDERDGFVMGEGAGILILEELSHAL 271 Query: 279 RDGDCIHAVILASGINSDGKRKTGITIPSQAGQAELMRSVLKQSGLRGADIDFIEAHGTG 338 G A ++ G +D T G A M L+Q+G+ D+ + AH T Sbjct: 272 ARGAKPIAELIGYGTTADAYHMT-AGPADGGGAARAMSIALQQAGIIATDVQHLNAHATS 330 Query: 339 TMVGDPVEAAAIGEVYGGQRAAPLPIGSIKANLGHLEAASGMASLVKTVLALKRRALPPQ 398 T VGD E AAI V+G + + S K+ GHL A+G + T+LAL+ + +P Sbjct: 331 TPVGDAGELAAIKAVFGTDN--RIAVTSTKSATGHLLGAAGGVEAIFTILALRDQVVPAT 388 Query: 399 IQLHEPHPSIDLEALNLRCHT-SPFPLSKEGPLLAGVNSFGFGGANAHVLLREY 451 + L +ID A + T S + E + N FGFGG NA VL + + Sbjct: 389 LNLK----TIDSGANGIDIVTHSARNMKIEHAM---SNGFGFGGVNASVLFKRW 435 Database: BlastDatabases/707/707 Posted date: Apr 13, 2011 12:58 PM Number of letters in database: 1,221,021 Number of sequences in database: 3697 Lambda K H 0.320 0.135 0.407 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 3697 Number of Hits to DB: 5,882,819 Number of extensions: 246392 Number of successful extensions: 764 Number of sequences better than 1.0e-08: 11 Number of HSP's gapped: 746 Number of HSP's successfully gapped: 11 Length of query: 2537 Length of database: 1,221,021 Length adjustment: 99 Effective length of query: 2438 Effective length of database: 855,018 Effective search space: 2084533884 Effective search space used: 2084533884 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.8 bits) S2: 138 (57.8 bits)