BLASTP 2.2.18 [Mar-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0001.4054.p
         (383 letters)

Database: BlastDatabases/707/707 
           3697 sequences; 1,221,021 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|152980392|ref|YP_001355052.1| dGTPase [Janthinobacterium sp. ...   585   e-168

>gi|152980392|ref|YP_001355052.1| dGTPase [Janthinobacterium sp.
           Marseille]
          Length = 382

 Score =  585 bits (1507), Expect = e-168,   Method: Compositional matrix adjust.
 Identities = 285/383 (74%), Positives = 326/383 (85%), Gaps = 3/383 (0%)

Query: 1   MHTEAPDHLAPYAAHSASSRGRRYSETPPGSRSEFQRDRDRIVHSTAFRRLEYKTQVFVN 60
           M+ EA  HLAPYAA S +S GRRY+E    SR+EFQRDRDRI+HS AFRRLEYKTQVFVN
Sbjct: 1   MNIEA--HLAPYAARSDTSTGRRYTEPSTSSRTEFQRDRDRIIHSAAFRRLEYKTQVFVN 58

Query: 61  HEGDLFRTRLTHSIEVAQIARSCARNLQLNEDLVEAISLAHDLGHTPFGHAGQDELNHCM 120
           HEGDLFRTRLTHSIEVAQIARS ARNLQLNEDLVEAISLAHDLGHTPFGHAGQD LN CM
Sbjct: 59  HEGDLFRTRLTHSIEVAQIARSIARNLQLNEDLVEAISLAHDLGHTPFGHAGQDALNACM 118

Query: 121 KHHGGFEHNLQSLRVVDELEQHYGAFDGLNLTFETREGILKHCSLHNARQLGEIGVRFLE 180
             +GGFEHNLQSLRVVD LEQ YGAFDGLNL FETREGILKHCSL NA++L  IG RF+E
Sbjct: 119 SDYGGFEHNLQSLRVVDTLEQRYGAFDGLNLMFETREGILKHCSLANAKKLDAIGQRFIE 178

Query: 181 RKQPSLEAQLANLADEIAYNNHDIDDGLRSGLLTMELMSEVDFFGRHLREVTQAYPGITG 240
           +KQP+LEAQLANLADEIAYNNHDIDDGLRSGLLT   + E++F+ RH  +V  A+PGITG
Sbjct: 179 KKQPTLEAQLANLADEIAYNNHDIDDGLRSGLLTTAQLDEIEFYARHRHQVELAFPGITG 238

Query: 241 RRVIHETVRRMINALIVDLIQTSRAHIAEIAPRDIEEVRNAPPLIAFSNAMASEAAELKK 300
           RR I+ET+RRMINALIVD+I+TS+  I     + I++VRNAP LIAFS+ M +EAA LK+
Sbjct: 239 RRAINETIRRMINALIVDVIETSQQRILSARLKTIDDVRNAPALIAFSDGMRAEAALLKR 298

Query: 301 FLREKLYRHYQVNRMTAKARRIIAEMFEAFMGQPNLLPPDYQVKGIADDTQRLDKQARKV 360
           FLRE LY+HYQVNRMT+KARRI+ E+FE FM +PNLLPPDYQ +  +D  Q +  QARKV
Sbjct: 299 FLRENLYQHYQVNRMTSKARRIVTELFETFMREPNLLPPDYQ-QPRSDAPQAITAQARKV 357

Query: 361 ADYIAGMTDRYAIREHRRLFVME 383
           +DYIAGMTDRYAIREH+RLF+++
Sbjct: 358 SDYIAGMTDRYAIREHKRLFMID 380


  Database: BlastDatabases/707/707
    Posted date:  Apr 13, 2011 12:58 PM
  Number of letters in database: 1,221,021
  Number of sequences in database:  3697
  
Lambda     K      H
   0.322    0.136    0.393 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 3697
Number of Hits to DB: 844,538
Number of extensions: 33316
Number of successful extensions: 88
Number of sequences better than 1.0e-08: 1
Number of HSP's gapped: 87
Number of HSP's successfully gapped: 1
Length of query: 383
Length of database: 1,221,021
Length adjustment: 85
Effective length of query: 298
Effective length of database: 906,776
Effective search space: 270219248
Effective search space used: 270219248
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 130 (54.7 bits)