BLASTP 2.2.18 [Mar-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0001.4014.p
         (307 letters)

Database: BlastDatabases/707/707 
           3697 sequences; 1,221,021 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|152981492|ref|YP_001354831.1| cell division protein FtsX [Jan...   351   3e-98

>gi|152981492|ref|YP_001354831.1| cell division protein FtsX
           [Janthinobacterium sp. Marseille]
          Length = 308

 Score =  351 bits (900), Expect = 3e-98,   Method: Compositional matrix adjust.
 Identities = 192/304 (63%), Positives = 238/304 (78%)

Query: 2   NWLRQHCAAIADALRHLLRSPGNFVLNVLVVSIALALPFAGLSALENVRPISDQMSVEPE 61
           +WLR H  A+ DA RHL ++PGNF+LNVLVVSIALALPFAG++ LENVRP+S+Q++VEPE
Sbjct: 3   SWLRHHGFALGDAFRHLFKTPGNFLLNVLVVSIALALPFAGMTLLENVRPVSEQLAVEPE 62

Query: 62  ISIFMKPDASREAAQAVGKTISQVLKDSKTNGKVEFIPREKAFDALKSKTGLADVLNTLG 121
           ISIFM  D SRE A A+   I ++ +++K   K+EFIPREKA   LK+KTGL D ++TLG
Sbjct: 63  ISIFMAMDTSRERATAIAPEIRRIAQEAKHPVKLEFIPREKALSTLKNKTGLDDAISTLG 122

Query: 122 SNPLPDSYVVRLPGFENAMNAGRVDDIAQQLKKEAGVDTVQIDSEWVKRLAALLRILRLV 181
            NPLPD+YVV++ GF+N  +A ++  I ++L+   GV+ VQ+DS WV+RLAALL+++RL+
Sbjct: 123 VNPLPDAYVVKMTGFQNDGDAKKIKAIVEKLQAINGVEYVQMDSAWVERLAALLQVMRLI 182

Query: 182 LLFLGITLGAVVVAVVFNTIRLQVMTQRDEIEVSRLFGATNSFIYRPFYYTGALLGLCAG 241
           L+FL  TLG VVVAVVFNTIRLQVMTQR+EIEVSRL GAT+SFI RPFYYTGALLGL AG
Sbjct: 183 LIFLATTLGVVVVAVVFNTIRLQVMTQREEIEVSRLVGATDSFICRPFYYTGALLGLIAG 242

Query: 242 LVALGLVVAAQQPLNEAILDFAHLYASEFQLALPSPMAIGLLLAVSGLLGLFGAMLSVRR 301
            VAL  V  A  PLN AI DFA LYASEF+LA    +   +LLA S  LGL GA+LSV+R
Sbjct: 243 GVALIAVALALNPLNAAIADFARLYASEFRLAPLDLLPTLILLAASAFLGLLGALLSVQR 302

Query: 302 QLAR 305
            LAR
Sbjct: 303 HLAR 306


  Database: BlastDatabases/707/707
    Posted date:  Apr 13, 2011 12:58 PM
  Number of letters in database: 1,221,021
  Number of sequences in database:  3697
  
Lambda     K      H
   0.323    0.138    0.387 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 3697
Number of Hits to DB: 534,540
Number of extensions: 17584
Number of successful extensions: 61
Number of sequences better than 1.0e-08: 1
Number of HSP's gapped: 61
Number of HSP's successfully gapped: 1
Length of query: 307
Length of database: 1,221,021
Length adjustment: 83
Effective length of query: 224
Effective length of database: 914,170
Effective search space: 204774080
Effective search space used: 204774080
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 129 (54.3 bits)