BLASTP 2.2.18 [Mar-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0001.4009.p
         (454 letters)

Database: BlastDatabases/707/707 
           3697 sequences; 1,221,021 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|152981205|ref|YP_001354827.1| hypothetical protein mma_3137 [...   515   e-147
gi|152980980|ref|YP_001354828.1| Zn-dependent peptidase [Janthin...    76   4e-15

>gi|152981205|ref|YP_001354827.1| hypothetical protein mma_3137
           [Janthinobacterium sp. Marseille]
          Length = 449

 Score =  515 bits (1326), Expect = e-147,   Method: Compositional matrix adjust.
 Identities = 265/444 (59%), Positives = 328/444 (73%), Gaps = 5/444 (1%)

Query: 10  IFQASMKKTFTLLLLPLALLLSASAQ-AALAIQSWTQPDGARVLLVSNHAIPMLDVSVQF 68
           +FQ +       ++  + L ++ +A  AAL IQSWT  +GARVL V NH IPMLDVSV F
Sbjct: 4   VFQQNSGVLMLKIISSVVLCVACNASYAALQIQSWTLSNGARVLFVENHTIPMLDVSVDF 63

Query: 69  DAGRRRDPAAKAGLAELTVASLTRGVEAA--DGKPALNEAQILDGFADVAAQQQGGAGQD 126
           DAG RRDPA K+G A LT A L RG+ AA    + AL+EAQI D FAD AAQ+ G    D
Sbjct: 64  DAGSRRDPAGKSGTAALTGAMLARGIHAAPTGNEGALSEAQISDAFADTAAQRGGRFDDD 123

Query: 127 RAGVSLRTLSSPAERDAALGLLARILAQPSFPQAALERDRALSIANLKEELTKPEAIAEK 186
           RAG +LRTL +  ER+ A+ LLAR+LA PSFP+  L+RD+A +I+ +KE LTKPEAIA K
Sbjct: 124 RAGATLRTLVT--ERETAVSLLARVLAYPSFPEEFLQRDKARTISAIKESLTKPEAIAGK 181

Query: 187 AFMQAAYGHHPYAIEASPATLQAITRDDLLAFHRSHYVANRAVIAMIGDITPEQARTMAS 246
           AF +  YG HPY  +A  A+++AI R+DLLAFH  +YVANRAV+A+IGD+T  +A  +A 
Sbjct: 182 AFSKRLYGSHPYGQQADVASIEAIKREDLLAFHAKYYVANRAVVALIGDVTRAEADQIAQ 241

Query: 247 ALTRALPQGAALPALPPVPAPQGSEQRIAHPASQSHILIGAPALQRGDPDFFALTVGNYV 306
            LT+ LPQG ALP LPPV    G E+RI+H ASQ+HILIG P + R DPD FALTVGNYV
Sbjct: 242 QLTQRLPQGEALPPLPPVTIAPGEEERISHQASQAHILIGMPGMARHDPDHFALTVGNYV 301

Query: 307 LGGGGFVSRLTDEVREKRGLSYSVYSGFSPLAQPGPFQIGLQTKKEQTAEALRVTRATLD 366
           LGGGGFVSRL  +VRE+RGLSY V S F P+AQPGPFQI LQTKKEQ  +AL+V R+T+ 
Sbjct: 302 LGGGGFVSRLMQQVREQRGLSYGVSSYFIPMAQPGPFQISLQTKKEQADQALQVVRSTVA 361

Query: 367 RFLQEGPTSAELKAAKDNLTGGFALRIDSNAKLLENLAVIGFYGLPLDYLDHWIERVRAV 426
            +L++GPT AELKAAKDNL GGFALRIDSN K+LEN+A IGFY LPLDYLD W ++V  V
Sbjct: 362 DYLRDGPTPAELKAAKDNLIGGFALRIDSNKKILENIAAIGFYDLPLDYLDTWTDKVSKV 421

Query: 427 SVQDVRAAFGKHVHPQALSTVIVG 450
           +  +V+AAF + +    L+TV+VG
Sbjct: 422 TAAEVKAAFQRKIQLDKLATVVVG 445


>gi|152980980|ref|YP_001354828.1| Zn-dependent peptidase
           [Janthinobacterium sp. Marseille]
          Length = 456

 Score = 76.3 bits (186), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 103/443 (23%), Positives = 182/443 (41%), Gaps = 22/443 (4%)

Query: 15  MKKTFTLLLLPLALLLSASAQAALAIQSWTQPDGARVLLVSNHAIPMLDVSVQFDAGRRR 74
           MK +   LLL  +++L+     A   + +T  +G ++++  +H  P +   V +  G   
Sbjct: 1   MKLSIRTLLLAASVVLTPLWANAAQTEEFTLKNGMKIIVNEDHRAPTVAHMVWYRVGSVD 60

Query: 75  DPAAKAGLAELTVASLTRGVEAADGKPALNEAQILDGFADVAAQQQGGAGQDRAGVSLRT 134
           +     G+A      + +G +       L   +     A +  ++     +D      + 
Sbjct: 61  ERNGVTGVAHALEHMMFKGTKK------LKPGEFSKRVAQLGGRENAFTSKDYTAYFQQI 114

Query: 135 LSSPAERDAALGLLARILAQPSFPQAALERD-RALSIANLKEELTKPEAIAEKAFMQAAY 193
             S  E  A + L A  +A   F +    ++ R +          +P +   +A     Y
Sbjct: 115 EKSKLE--AVMALEADRMANLVFDKNEFAKEIRVVMEERRLRTDDQPTSKLYEALAATTY 172

Query: 194 GHHPYA--IEASPATLQAITRDDLLAFHRSHYVANRAVIAMIGDITPEQARTMASALTRA 251
             HPY   I      LQ +T +D+  +H + Y  N A + + GD+ P++   +A     +
Sbjct: 173 AVHPYRNPIIGWMDDLQNMTVNDVKEWHDTWYAPNNATMVVSGDVEPKKVFALAQKYFGS 232

Query: 252 LPQGAALPALPPVPAPQGSEQRIA--HPASQSHILIG--APALQR--GDPDFFALTVGNY 305
            P        P    PQ   +R+    PA   ++++    PAL+    D D +AL V + 
Sbjct: 233 YPAKTLTRTRPQNEPPQEGVKRVTVKAPAENPYVVLAFKVPALRDIAKDDDAYALDVLSA 292

Query: 306 VLGGGGFVSRLTDEVREKRGLSYSVYSGFSPLAQPGPFQIGLQTKKEQ--TAEAL-RVTR 362
           VL G    +RL+ ++     ++  V + +S +A+ GP    L     Q  T E L ++ R
Sbjct: 293 VLDGYDN-ARLSAKLVRTDRVANDVGASYSGIAR-GPVLFILDGTPAQGTTTEQLEKLLR 350

Query: 363 ATLDRFLQEGPTSAELKAAKDNLTGGFALRIDSNAKLLENLAVIGFYGLPLDYLDHWIER 422
           A + R   EG + AELK  K  L      + DS       + V+   G      D  IE+
Sbjct: 351 AEVARIANEGVSEAELKRVKTQLIAAQIYKRDSVFGQAMEIGVMEMSGFSYKDTDRVIEK 410

Query: 423 VRAVSVQDVRAAFGKHVHPQALS 445
           +RAV+ Q V+A   K+    AL+
Sbjct: 411 LRAVTPQQVQAVAQKYFGDDALT 433


  Database: BlastDatabases/707/707
    Posted date:  Apr 13, 2011 12:58 PM
  Number of letters in database: 1,221,021
  Number of sequences in database:  3697
  
Lambda     K      H
   0.319    0.133    0.379 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 3697
Number of Hits to DB: 910,915
Number of extensions: 33309
Number of successful extensions: 124
Number of sequences better than 1.0e-08: 2
Number of HSP's gapped: 122
Number of HSP's successfully gapped: 2
Length of query: 454
Length of database: 1,221,021
Length adjustment: 86
Effective length of query: 368
Effective length of database: 903,079
Effective search space: 332333072
Effective search space used: 332333072
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 131 (55.1 bits)