BLASTP 2.2.18 [Mar-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0001.4001.p
         (401 letters)

Database: BlastDatabases/707/707 
           3697 sequences; 1,221,021 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|152980194|ref|YP_001352245.1| acetyl-CoA C-acetyltransferase ...   293   1e-80
gi|152979836|ref|YP_001354779.1| acetyl-CoA acetyltransferase [J...   268   4e-73

>gi|152980194|ref|YP_001352245.1| acetyl-CoA C-acetyltransferase
           [Janthinobacterium sp. Marseille]
          Length = 391

 Score =  293 bits (750), Expect = 1e-80,   Method: Compositional matrix adjust.
 Identities = 171/400 (42%), Positives = 243/400 (60%), Gaps = 17/400 (4%)

Query: 4   LICDAIRTPFGRYGGALGAMRADDLAAAPIRSLMERNPGVDWSRVDDILYGCANQAGEDN 63
           +I  A RT  G++GGAL    A DL A  I++L+ R+ G+   ++ +++ G    AG   
Sbjct: 5   VIVSAGRTGVGKFGGALARTAASDLGAHVIKNLLARS-GIAADQISEVILGQVLTAG-CG 62

Query: 64  RNVARMAGLLAGLPIEVPGTTINRLCGSSLDAVGLAARAIKSGEVELMIAGGVESMTRAP 123
           +N AR A +  G+P  VP  TIN++CGS L A  LA +AI+ G+ +++IAGG E+M+ +P
Sbjct: 63  QNPARQALIRGGIPDMVPAFTINKVCGSGLKATHLATQAIRCGDAQIIIAGGQENMSASP 122

Query: 124 FVMGKAESAFSR-SAAIFDTTIG---WRFVNPLMKAQYGIDSMPETAENVATDFRINRAD 179
            V+  +   F    A + D  I    W   N     QY    M  TAEN+A  F I+R +
Sbjct: 123 HVLNNSRDGFRMGDAKLVDIMIHDGLWDVYN-----QY---HMGTTAENIAKKFGISRQE 174

Query: 180 QDAFALRSQQRWAAAQEAGFFAGEIAPLAIPQKKGDPLIITTDEHPRPDTTLGTLSKLKG 239
           QD FAL SQ +  AAQ+AG F  EI P  I  KKG+  +  +DE+ +  TTL +L+ L+ 
Sbjct: 175 QDEFALESQNKAEAAQKAGKFKDEIIPFEIQSKKGNT-VFDSDEYIKHGTTLESLAALRP 233

Query: 240 VVRPDGTVTAGNASGVNDGACALLLASPQAADRYRLQPRARVLGMATAGVAPRIMGFGPA 299
               DGTVTAGNASG+NDGA A+++ + Q A    L+P A++   ++AGV P +MG GP 
Sbjct: 234 AFSKDGTVTAGNASGINDGAAAVIMMTAQKAKELGLKPLAKIKAYSSAGVDPSVMGMGPV 293

Query: 300 PAARKVLAQVGLTLAQMDVIELNEAFAAQGLAVTRELGLPDDAAHVNPNGGAIAIGHPLG 359
           PAA+  L + G     +D++E+NEAFAAQ +AV RE+G   D   +N NGGAIAIGHP+G
Sbjct: 294 PAAQLCLKKAGWKHQDLDLMEINEAFAAQAIAVNREMGW--DTRKINVNGGAIAIGHPIG 351

Query: 360 ASGARLVTTALNQLECSGGRYALCTMCIGVGQGIALVIER 399
           ASG R++ T L+++        L ++CIG G G+AL IER
Sbjct: 352 ASGCRILVTLLHEMIRRDAHKGLASLCIGGGMGVALAIER 391


>gi|152979836|ref|YP_001354779.1| acetyl-CoA acetyltransferase
           [Janthinobacterium sp. Marseille]
          Length = 398

 Score =  268 bits (685), Expect = 4e-73,   Method: Compositional matrix adjust.
 Identities = 172/409 (42%), Positives = 228/409 (55%), Gaps = 29/409 (7%)

Query: 3   ALICDAIRTPFGRY-GGALGAMRADDLAAAPIRSLMERNPGVDWSRVDDILYGCANQAGE 61
           A I  A RTP G+   G     R DDL    ++S + + P +D + ++D + GC+    E
Sbjct: 8   AYIVAATRTPIGKAPRGMFKNTRPDDLLVHALQSALSQVPSLDPNLIEDAIVGCSFPEAE 67

Query: 62  DNRNVARMAGLLAGLPIEVPGTTINRLCGSSLDAVGLAARAIKSGEVELMIAGGVESMTR 121
              N+ARM  LLAGLP  V G T+NR C S L A+ +AA  I+ GE ++MIA G ESM+ 
Sbjct: 68  QGLNMARMGVLLAGLPKTVGGVTVNRYCASGLTAIAMAADRIRVGEADVMIAAGAESMSM 127

Query: 122 APFVMGKAESAFSRSAAIF-DTTIGWRFVNPLMKAQYGIDSMPETAENVATDFRINRADQ 180
            P +MG   S    +  IF +  IG  +             M  TAE VAT ++++R  Q
Sbjct: 128 VP-MMGHHPS---MNMGIFKEENIGMAY------------GMGLTAEKVATQWKVSREAQ 171

Query: 181 DAFALRSQQRWAAAQEAGFFAGEIAPLAI----PQKKGDPLIITT-----DEHPRPDTTL 231
           D FAL S  +  AAQ++G F  E+  + I    P      + +TT     DE  R DT L
Sbjct: 172 DQFALNSHLKALAAQQSGEFNNEMTAVEIVERFPNLSSGQIDVTTRLVNMDEGARADTNL 231

Query: 232 GTLSKLKGVVRPDGTVTAGNASGVNDGACALLLASPQAADRYRLQPRARVLGMATAGVAP 291
             L+KL+ V  P G+VTAGN+S  +DGA AL+L S +   ++ L P AR +  A  GV P
Sbjct: 232 EALAKLRPVFSPKGSVTAGNSSQTSDGAGALILVSEKILKQFNLTPLARFVSFAVRGVPP 291

Query: 292 RIMGFGPAPAARKVLAQVGLTLAQMDVIELNEAFAAQGLAVTRELGLPDDAAHVNPNGGA 351
            IMG GP  A    L   GL   QMD IELNEAFAAQ LAV ++LGL  D A VNP GGA
Sbjct: 292 EIMGIGPKEAIPAALRVAGLKQDQMDWIELNEAFAAQALAVIQDLGL--DPAKVNPMGGA 349

Query: 352 IAIGHPLGASGARLVTTALNQLECSGGRYALCTMCIGVGQGIALVIERV 400
           IA+GHPLGA+GA    T ++ L     +Y + TMC+G G G A + E++
Sbjct: 350 IALGHPLGATGAIRSATVVHALRRKNLKYGMVTMCVGTGMGAAGIFEKM 398


  Database: BlastDatabases/707/707
    Posted date:  Apr 13, 2011 12:58 PM
  Number of letters in database: 1,221,021
  Number of sequences in database:  3697
  
Lambda     K      H
   0.320    0.135    0.397 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 3697
Number of Hits to DB: 955,053
Number of extensions: 40987
Number of successful extensions: 142
Number of sequences better than 1.0e-08: 2
Number of HSP's gapped: 135
Number of HSP's successfully gapped: 2
Length of query: 401
Length of database: 1,221,021
Length adjustment: 85
Effective length of query: 316
Effective length of database: 906,776
Effective search space: 286541216
Effective search space used: 286541216
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 130 (54.7 bits)