BLASTP 2.2.18 [Mar-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0001.3897.p
         (417 letters)

Database: BlastDatabases/707/707 
           3697 sequences; 1,221,021 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|152980194|ref|YP_001352245.1| acetyl-CoA C-acetyltransferase ...   229   2e-61
gi|152979836|ref|YP_001354779.1| acetyl-CoA acetyltransferase [J...   181   7e-47

>gi|152980194|ref|YP_001352245.1| acetyl-CoA C-acetyltransferase
           [Janthinobacterium sp. Marseille]
          Length = 391

 Score =  229 bits (584), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 140/403 (34%), Positives = 214/403 (53%), Gaps = 14/403 (3%)

Query: 10  FKDIWLIGGVRTPMVDYCTSFSQLSPTDMGIKVAREVLARTGIAATDIGSVIAGNMAPGD 69
             D+ ++   RT +  +  + ++ + +D+G  V + +LAR+GIAA  I  VI G +    
Sbjct: 1   MDDVVIVSAGRTGVGKFGGALARTAASDLGAHVIKNLLARSGIAADQISEVILGQVLTAG 60

Query: 70  AYQYMLPRHIGLYAGVPITTPAIMVQRICGTGFELIRQAGDQIERGYTETALIVGSESMT 129
             Q    R   +  G+P   PA  + ++CG+G +    A   I  G  +  +  G E+M+
Sbjct: 61  CGQNP-ARQALIRGGIPDMVPAFTINKVCGSGLKATHLATQAIRCGDAQIIIAGGQENMS 119

Query: 130 RNPIAAFDHRTGFKLGAPVQFQDYMWEALVDPAPGITMPQTAENLARKYGITRAEVDAYA 189
            +P    + R GF++G        + + L D      M  TAEN+A+K+GI+R E D +A
Sbjct: 120 ASPHVLNNSRDGFRMGDAKLVDIMIHDGLWDVYNQYHMGTTAENIAKKFGISRQEQDEFA 179

Query: 190 AYSFERALKAQAAGFHAGEIVSVVNETFKLDGYHDRHIKLQGKISEASTDTHPRPSPVDV 249
             S  +A  AQ AG    EI+    ++ K +   D            S +     + ++ 
Sbjct: 180 LESQNKAEAAQKAGKFKDEIIPFEIQSKKGNTVFD------------SDEYIKHGTTLES 227

Query: 250 LAKLRTLY-PDGVQTGGNSSALVDAAAATIVASGDYLRRNDRQPLARVVAAAVAGVPPEI 308
           LA LR  +  DG  T GN+S + D AAA I+ +    +    +PLA++ A + AGV P +
Sbjct: 228 LAALRPAFSKDGTVTAGNASGINDGAAAVIMMTAQKAKELGLKPLAKIKAYSSAGVDPSV 287

Query: 309 MGIGPVPAIRTLLERNGLSVNDIGCFEINEAQGAQIVAVERELGLDRERLNVNGGAIALG 368
           MG+GPVPA +  L++ G    D+   EINEA  AQ +AV RE+G D  ++NVNGGAIA+G
Sbjct: 288 MGMGPVPAAQLCLKKAGWKHQDLDLMEINEAFAAQAIAVNREMGWDTRKINVNGGAIAIG 347

Query: 369 HPLAATGVRLSITAAREMNRRGARYSVASACIGGGQGIALLLE 411
           HP+ A+G R+ +T   EM RR A   +AS CIGGG G+AL +E
Sbjct: 348 HPIGASGCRILVTLLHEMIRRDAHKGLASLCIGGGMGVALAIE 390


>gi|152979836|ref|YP_001354779.1| acetyl-CoA acetyltransferase
           [Janthinobacterium sp. Marseille]
          Length = 398

 Score =  181 bits (459), Expect = 7e-47,   Method: Compositional matrix adjust.
 Identities = 137/409 (33%), Positives = 199/409 (48%), Gaps = 22/409 (5%)

Query: 10  FKDIWLIGGVRTPMVDYCTS-FSQLSPTDMGIKVAREVLART-GIAATDIGSVIAGNMAP 67
            +D +++   RTP+       F    P D+ +   +  L++   +    I   I G   P
Sbjct: 5   LQDAYIVAATRTPIGKAPRGMFKNTRPDDLLVHALQSALSQVPSLDPNLIEDAIVGCSFP 64

Query: 68  GDAYQYMLPRHIGLYAGVPITTPAIMVQRICGTGFELIRQAGDQIERGYTETALIVGSES 127
                  + R   L AG+P T   + V R C +G   I  A D+I  G  +  +  G+ES
Sbjct: 65  EAEQGLNMARMGVLLAGLPKTVGGVTVNRYCASGLTAIAMAADRIRVGEADVMIAAGAES 124

Query: 128 MTRNPIAAFDHRTGFKLGAPVQFQDYMWEALVDPAPGITMPQTAENLARKYGITRAEVDA 187
           M+  P+    H     +G          E  +  A G+ +  TAE +A ++ ++R   D 
Sbjct: 125 MSMVPM--MGHHPSMNMG-------IFKEENIGMAYGMGL--TAEKVATQWKVSREAQDQ 173

Query: 188 YAAYSFERALKAQAAGFHAGEIVSV-VNETFK--LDGYHDRHIKLQGKISEASTDTHPRP 244
           +A  S  +AL AQ +G    E+ +V + E F     G  D   +L      A  DT+   
Sbjct: 174 FALNSHLKALAAQQSGEFNNEMTAVEIVERFPNLSSGQIDVTTRLVNMDEGARADTN--- 230

Query: 245 SPVDVLAKLRTLY-PDGVQTGGNSSALVDAAAATIVASGDYLRRNDRQPLARVVAAAVAG 303
             ++ LAKLR ++ P G  T GNSS   D A A I+ S   L++ +  PLAR V+ AV G
Sbjct: 231 --LEALAKLRPVFSPKGSVTAGNSSQTSDGAGALILVSEKILKQFNLTPLARFVSFAVRG 288

Query: 304 VPPEIMGIGPVPAIRTLLERNGLSVNDIGCFEINEAQGAQIVAVERELGLDRERLNVNGG 363
           VPPEIMGIGP  AI   L   GL  + +   E+NEA  AQ +AV ++LGLD  ++N  GG
Sbjct: 289 VPPEIMGIGPKEAIPAALRVAGLKQDQMDWIELNEAFAAQALAVIQDLGLDPAKVNPMGG 348

Query: 364 AIALGHPLAATGVRLSITAAREMNRRGARYSVASACIGGGQGIALLLEN 412
           AIALGHPL ATG   S T    + R+  +Y + + C+G G G A + E 
Sbjct: 349 AIALGHPLGATGAIRSATVVHALRRKNLKYGMVTMCVGTGMGAAGIFEK 397


  Database: BlastDatabases/707/707
    Posted date:  Apr 13, 2011 12:58 PM
  Number of letters in database: 1,221,021
  Number of sequences in database:  3697
  
Lambda     K      H
   0.319    0.135    0.392 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 3697
Number of Hits to DB: 965,172
Number of extensions: 40480
Number of successful extensions: 144
Number of sequences better than 1.0e-08: 2
Number of HSP's gapped: 141
Number of HSP's successfully gapped: 2
Length of query: 417
Length of database: 1,221,021
Length adjustment: 86
Effective length of query: 331
Effective length of database: 903,079
Effective search space: 298919149
Effective search space used: 298919149
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 131 (55.1 bits)