BLASTP 2.2.18 [Mar-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0001.3889.p
         (400 letters)

Database: BlastDatabases/707/707 
           3697 sequences; 1,221,021 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|152980194|ref|YP_001352245.1| acetyl-CoA C-acetyltransferase ...   298   4e-82
gi|152979836|ref|YP_001354779.1| acetyl-CoA acetyltransferase [J...   293   1e-80

>gi|152980194|ref|YP_001352245.1| acetyl-CoA C-acetyltransferase
           [Janthinobacterium sp. Marseille]
          Length = 391

 Score =  298 bits (763), Expect = 4e-82,   Method: Compositional matrix adjust.
 Identities = 169/403 (41%), Positives = 247/403 (61%), Gaps = 16/403 (3%)

Query: 1   MKDVFICDAIRTPIGRYGGALKDVRADDLGAVPLRALMERNPQVDWKAVDDVIFGCANQA 60
           M DV I  A RT +G++GGAL    A DLGA  ++ L+ R+  +    + +VI G    A
Sbjct: 1   MDDVVIVSAGRTGVGKFGGALARTAASDLGAHVIKNLLARSG-IAADQISEVILGQVLTA 59

Query: 61  GEDNRNVARMSLLLAGLPQEVPGSTINRLCGSGMDALGTAARAIKSGETQLMIAGGVESM 120
           G   +N AR +L+  G+P  VP  TIN++CGSG+ A   A +AI+ G+ Q++IAGG E+M
Sbjct: 60  G-CGQNPARQALIRGGIPDMVPAFTINKVCGSGLKATHLATQAIRCGDAQIIIAGGQENM 118

Query: 121 TRAPFVMGKADSAFSR-QAAIQDTTIG---WRFVNALMKQKYGVDAMPETAENVAVDFKV 176
           + +P V+  +   F    A + D  I    W   N     +Y    M  TAEN+A  F +
Sbjct: 119 SASPHVLNNSRDGFRMGDAKLVDIMIHDGLWDVYN-----QY---HMGTTAENIAKKFGI 170

Query: 177 SRQDQDQFAVRSQAKAAAAQANGTLAQEIVPVVIPQKKGDPITVTQDEHPRATSMEALAR 236
           SRQ+QD+FA+ SQ KA AAQ  G    EI+P  I  KKG+ +  + +     T++E+LA 
Sbjct: 171 SRQEQDEFALESQNKAEAAQKAGKFKDEIIPFEIQSKKGNTVFDSDEYIKHGTTLESLAA 230

Query: 237 LKGVVKPDGTVTAGNASGVNDGACALLLASAEAVEKYQLKPRARILGMATAGVAPRIMGM 296
           L+     DGTVTAGNASG+NDGA A+++ +A+  ++  LKP A+I   ++AGV P +MGM
Sbjct: 231 LRPAFSKDGTVTAGNASGINDGAAAVIMMTAQKAKELGLKPLAKIKAYSSAGVDPSVMGM 290

Query: 297 GPAPASKKVLAQLGMSIDQMDVIELNEAFASQGLAVLRELGVADDDARVNPNGGAIALGH 356
           GP PA++  L + G     +D++E+NEAFA+Q +AV RE+G   D  ++N NGGAIA+GH
Sbjct: 291 GPVPAAQLCLKKAGWKHQDLDLMEINEAFAAQAIAVNREMGW--DTRKINVNGGAIAIGH 348

Query: 357 PLGMSGARLVTTATYQLERTGGRYALCTMCIGVGQGIAMVIER 399
           P+G SG R++ T  +++ R      L ++CIG G G+A+ IER
Sbjct: 349 PIGASGCRILVTLLHEMIRRDAHKGLASLCIGGGMGVALAIER 391


>gi|152979836|ref|YP_001354779.1| acetyl-CoA acetyltransferase
           [Janthinobacterium sp. Marseille]
          Length = 398

 Score =  293 bits (750), Expect = 1e-80,   Method: Compositional matrix adjust.
 Identities = 180/411 (43%), Positives = 240/411 (58%), Gaps = 28/411 (6%)

Query: 1   MKDVFICDAIRTPIGRYG-GALKDVRADDLGAVPLRALMERNPQVDWKAVDDVIFGCANQ 59
           ++D +I  A RTPIG+   G  K+ R DDL    L++ + + P +D   ++D I GC+  
Sbjct: 5   LQDAYIVAATRTPIGKAPRGMFKNTRPDDLLVHALQSALSQVPSLDPNLIEDAIVGCSFP 64

Query: 60  AGEDNRNVARMSLLLAGLPQEVPGSTINRLCGSGMDALGTAARAIKSGETQLMIAGGVES 119
             E   N+ARM +LLAGLP+ V G T+NR C SG+ A+  AA  I+ GE  +MIA G ES
Sbjct: 65  EAEQGLNMARMGVLLAGLPKTVGGVTVNRYCASGLTAIAMAADRIRVGEADVMIAAGAES 124

Query: 120 MTRAPFVMGKADSAFSRQAAIQDTTIGWRFVNALMKQKYGVDAMPETAENVAVDFKVSRQ 179
           M+  P +MG   S        ++  IG           YG   M  TAE VA  +KVSR+
Sbjct: 125 MSMVP-MMGHHPSM--NMGIFKEENIG---------MAYG---MGLTAEKVATQWKVSRE 169

Query: 180 DQDQFAVRSQAKAAAAQANGTLAQEIVPVVI----PQKKGDPITVT-----QDEHPRA-T 229
            QDQFA+ S  KA AAQ +G    E+  V I    P      I VT      DE  RA T
Sbjct: 170 AQDQFALNSHLKALAAQQSGEFNNEMTAVEIVERFPNLSSGQIDVTTRLVNMDEGARADT 229

Query: 230 SMEALARLKGVVKPDGTVTAGNASGVNDGACALLLASAEAVEKYQLKPRARILGMATAGV 289
           ++EALA+L+ V  P G+VTAGN+S  +DGA AL+L S + ++++ L P AR +  A  GV
Sbjct: 230 NLEALAKLRPVFSPKGSVTAGNSSQTSDGAGALILVSEKILKQFNLTPLARFVSFAVRGV 289

Query: 290 APRIMGMGPAPASKKVLAQLGMSIDQMDVIELNEAFASQGLAVLRELGVADDDARVNPNG 349
            P IMG+GP  A    L   G+  DQMD IELNEAFA+Q LAV+++LG+  D A+VNP G
Sbjct: 290 PPEIMGIGPKEAIPAALRVAGLKQDQMDWIELNEAFAAQALAVIQDLGL--DPAKVNPMG 347

Query: 350 GAIALGHPLGMSGARLVTTATYQLERTGGRYALCTMCIGVGQGIAMVIERV 400
           GAIALGHPLG +GA    T  + L R   +Y + TMC+G G G A + E++
Sbjct: 348 GAIALGHPLGATGAIRSATVVHALRRKNLKYGMVTMCVGTGMGAAGIFEKM 398


  Database: BlastDatabases/707/707
    Posted date:  Apr 13, 2011 12:58 PM
  Number of letters in database: 1,221,021
  Number of sequences in database:  3697
  
Lambda     K      H
   0.318    0.133    0.379 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 3697
Number of Hits to DB: 900,697
Number of extensions: 36826
Number of successful extensions: 126
Number of sequences better than 1.0e-08: 2
Number of HSP's gapped: 119
Number of HSP's successfully gapped: 2
Length of query: 400
Length of database: 1,221,021
Length adjustment: 85
Effective length of query: 315
Effective length of database: 906,776
Effective search space: 285634440
Effective search space used: 285634440
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 130 (54.7 bits)