BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0001.3883.p (342 letters) Database: BlastDatabases/707/707 3697 sequences; 1,221,021 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gi|152979928|ref|YP_001352913.1| vanillate monooxygenase, alpha ... 201 4e-53 gi|152981997|ref|YP_001354194.1| hypothetical protein mma_2504 [... 86 3e-18 gi|152981999|ref|YP_001353364.1| hypothetical protein mma_1674 [... 72 4e-14 gi|152981877|ref|YP_001355367.1| hypothetical protein mma_3677 [... 64 1e-11 gi|152981998|ref|YP_001351914.1| hypothetical protein mma_0224 [... 62 5e-11 >gi|152979928|ref|YP_001352913.1| vanillate monooxygenase, alpha subunit [Janthinobacterium sp. Marseille] Length = 358 Score = 201 bits (512), Expect = 4e-53, Method: Compositional matrix adjust. Identities = 116/343 (33%), Positives = 175/343 (51%), Gaps = 5/343 (1%) Query: 2 FVLNQWYVAGFSWELQERPLARTLLSQPVVLFRTGTGEVAALEDRCCHRSLPLSCGTVEE 61 F+ N WYVA +S E+ + L R +L +PV+++R G AL DRC H+ PLS G ++ Sbjct: 4 FIRNAWYVAAWSKEVGRQYLTRRILGEPVLMYRKEDGSPVALLDRCPHKLAPLSLGELKG 63 Query: 62 QGLRCGYHGLLFAPGGQCLEIPGQARVPAKACVKSFPVAVRNQVIWIWMGEQQDLPTPAT 121 + CGYHGL F G C+ +PGQ ++P A VKSFP+ R +WIWMGE L P Sbjct: 64 DIVECGYHGLQFDCSGTCVRVPGQPQIPPTAQVKSFPLVERYNAVWIWMGEAT-LANPDD 122 Query: 122 PPEIAAHDDPRYRF-KGGVFHYEAPYQLIHDNLLDLSHVGYVHSKTIGGNAKTHMEAPTR 180 E+ + P + G H+++ Y I DNL+D +H YVH TIG A ++ + Sbjct: 123 IVEVERYQMPGWDLIDGQYLHFKSNYLNITDNLVDPAHTTYVHKNTIGNAAGENV--AVK 180 Query: 181 VSSEGQHVRVVRHMLNSLPPATYTAAWPFRERIDRWQEIDFHVSHLN-IFTGAVDAGSES 239 V HV R + N+ P F+ DRWQ + ++ + G VDAG E Sbjct: 181 VEQGDNHVLAYRWIENAEPIPLAKKMGDFKGLTDRWQYYYLLMPSISYVDFGTVDAGIER 240 Query: 240 VDNPARGGFHMRGFHGITPETKHSSHYFWTMACSSHPDMPDNLEDVYQQTAATFEEDRII 299 + G ++ +TPET++++HYFW + D DV + TFEED I Sbjct: 241 SEENKNRGLRSFSYNFLTPETENTTHYFWLHVRNYQTGKADIDADVTKLMTLTFEEDMAI 300 Query: 300 IEAQYRNMQQFSGRDMVDIHVDAGANRARRIIDQLISTPRQAA 342 + A + + R+ V + +D R R+++D+ I+ + AA Sbjct: 301 LAAVQQAQDETGVREYVRLGIDNAPARIRKMVDKRIAAEQLAA 343 >gi|152981997|ref|YP_001354194.1| hypothetical protein mma_2504 [Janthinobacterium sp. Marseille] Length = 354 Score = 86.3 bits (212), Expect = 3e-18, Method: Compositional matrix adjust. Identities = 58/189 (30%), Positives = 91/189 (48%), Gaps = 10/189 (5%) Query: 7 WYVAGFSWELQERPLARTLLSQPVVLFRTGTGEVAALEDRCCHRSLPLSCGTVEEQGLRC 66 W+ ++ EL + PLA TLL Q +VL R G V AL+ RC H+ L+ G + + + C Sbjct: 30 WHPVAYASELGDTPLAVTLLDQSLVLARL-NGVVTALDSRCPHKGTSLALGQIVDGTIEC 88 Query: 67 GYHGLLFAPGGQCLEIPGQARV--PAKACVKSFPVAVRNQVIWIWMGEQQDLPTPATPPE 124 YHG + GG+C+ +P + + KA V + A +IW+ + E P A P+ Sbjct: 89 PYHGWRYDDGGKCVRVPAREELCDVLKASVAKYHAAEHVGIIWVALEE----PLYAF-PD 143 Query: 125 IAAHDDPRYR-FKGGVFHYEAPYQLIHDNLLDLSHVGYVHSKTIGGNAKTHMEAPTRVSS 183 +D Y +G + + +N +D +H +VH TIG + +E P V Sbjct: 144 FPEFEDAEYNVLQGTSYDWATSSPRRLENFVDFAHFSFVHDGTIGSRSNPRVE-PVDVWR 202 Query: 184 EGQHVRVVR 192 EG +R R Sbjct: 203 EGPVLRFNR 211 >gi|152981999|ref|YP_001353364.1| hypothetical protein mma_1674 [Janthinobacterium sp. Marseille] Length = 231 Score = 72.4 bits (176), Expect = 4e-14, Method: Compositional matrix adjust. Identities = 43/131 (32%), Positives = 60/131 (45%), Gaps = 10/131 (7%) Query: 5 NQWYVAGFSWELQERPLARTLL-SQPVVLFRTGTGEVAALEDRCCHRSLPLSCGTVEEQG 63 N W V S E+ + + L Q + L+R GE+ +RC HR + G + + Sbjct: 9 NNWSVVAASVEVPAGEIVQAFLHGQELALWRNAAGEIQVWANRCPHRGTRFTMGRIVDDQ 68 Query: 64 LRCGYHGLLFAPGGQCLEIPGQARV--PAKACVKSFPVAVRNQVIWIWMGEQQDLPTPAT 121 L CGYHG F GGQC IP ++ P C K+F R +IW +G P T Sbjct: 69 LSCGYHGWRFGSGGQCTYIPAHPKLPPPKTVCAKTFQAVERYGMIWTSLG------APET 122 Query: 122 P-PEIAAHDDP 131 P++ A DP Sbjct: 123 EVPQLQALADP 133 >gi|152981877|ref|YP_001355367.1| hypothetical protein mma_3677 [Janthinobacterium sp. Marseille] Length = 580 Score = 64.3 bits (155), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 54/168 (32%), Positives = 75/168 (44%), Gaps = 15/168 (8%) Query: 7 WYVAGFSWELQERPLART-LLSQPVVLFRTGTGEVAALEDRCCHRSLPLSCGTVEEQGLR 65 W+ S EL R +A L + L+R TG V E+RC HR L L+ GT L+ Sbjct: 9 WFPLVRSTELPYRHVAHAQLFGYELALWRDDTGAVNVWENRCPHRGLRLTLGTNTGTDLQ 68 Query: 66 CGYHGLLFAPG-GQCLEIPGQA--RVPAKACVKSFPVAVRNQVIWIWMGEQQDLPT-PAT 121 C YHG F G G C +P P+KACV + PV+ RN +W P A+ Sbjct: 69 CRYHGWSFESGDGGCSFVPAHRDDSEPSKACVLTLPVSERNGFVWAAFDPDTTEPQFSAS 128 Query: 122 PPEIA------AHDDPRYRFKGGVFHY----EAPYQLIHDNLLDLSHV 159 P + A A P R + + HY +A + N ++SH+ Sbjct: 129 PSKQAIVLRSVAMQGPLERVRAALEHYRYSPKAAETSVPTNSAEVSHL 176 >gi|152981998|ref|YP_001351914.1| hypothetical protein mma_0224 [Janthinobacterium sp. Marseille] Length = 365 Score = 62.0 bits (149), Expect = 5e-11, Method: Compositional matrix adjust. Identities = 52/201 (25%), Positives = 88/201 (43%), Gaps = 14/201 (6%) Query: 20 PLARTLLSQPVVLFRTGTGEVAALEDRCCHRSLPLSCGTVEE----QGLRCGYHGLLFAP 75 P+A LL + +VL + G +AA+ DRC HR LS G V++ L C YHG + Sbjct: 36 PMAVKLLGEDIVLAKLD-GRIAAMRDRCAHRFAKLSKGCVKQGEAGDRLECPYHGWQYDK 94 Query: 76 GGQCLEIPG--QARVPAKACVKSFPVAVRNQVIWIWMGEQQDLPTPATPPEIAAHDDPRY 133 G C IP + +P KA +F VR ++W+ + + P + ++ Sbjct: 95 DGACRTIPACPELPIPKKARSDAFECEVRYDIVWVRLDASFGV---TEIPVFSDWEEEGM 151 Query: 134 R-FKGGVFHYEAPYQLIHDNLLDLSHVGYVHSKTI--GGNAKTHMEAPTRVSSEGQ-HVR 189 R + ++ + +N D SH +VH T+ A+ + +RV E + + Sbjct: 152 RVIVVDSYVWQTTAERRWENFTDFSHFAFVHPGTLYDAAYARPPLAPVSRVGGEMRFSIE 211 Query: 190 VVRHMLNSLPPATYTAAWPFR 210 + M + LP A+ +R Sbjct: 212 PPKEMTDQLPDDCPIGAFIYR 232 Database: BlastDatabases/707/707 Posted date: Apr 13, 2011 12:58 PM Number of letters in database: 1,221,021 Number of sequences in database: 3697 Lambda K H 0.322 0.136 0.436 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 3697 Number of Hits to DB: 894,081 Number of extensions: 39182 Number of successful extensions: 97 Number of sequences better than 1.0e-08: 5 Number of HSP's gapped: 89 Number of HSP's successfully gapped: 5 Length of query: 342 Length of database: 1,221,021 Length adjustment: 84 Effective length of query: 258 Effective length of database: 910,473 Effective search space: 234902034 Effective search space used: 234902034 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.9 bits) S2: 130 (54.7 bits)