BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0001.3831.p (540 letters) Database: BlastDatabases/707/707 3697 sequences; 1,221,021 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gi|152979793|ref|YP_001353521.1| glucan biosynthesis protein D [... 382 e-107 gi|152980965|ref|YP_001355204.1| glucan biosynthesis protein G [... 331 5e-92 >gi|152979793|ref|YP_001353521.1| glucan biosynthesis protein D [Janthinobacterium sp. Marseille] Length = 527 Score = 382 bits (981), Expect = e-107, Method: Compositional matrix adjust. Identities = 234/542 (43%), Positives = 316/542 (58%), Gaps = 35/542 (6%) Query: 4 RRHFLTAAGAASALAALGVSPQALAAQGMQ------MGRAQPFSFEQLIARARDMARTPY 57 RR L A+ +AL G +L A G +G+A+ F + L +AR +A PY Sbjct: 3 RRDLLKAS---AALTLAGFHAPSLYAAGSNTSELKVLGKAEAFDYAWLKGQARTLASKPY 59 Query: 58 QAPP-AVPAAILDQIDYDAHGKIHFKTDLAVFAQGPGAFPLTFFHLGKFFRVPVRMF-IL 115 AP VPAA+ +D+D + I ++ D A++A+ F + FFHLG + V++ + Sbjct: 60 HAPDYPVPAAV-KALDWDQYQAIGYRDDHALWAKDKLRFQVKFFHLGMYANQSVKIHEVK 118 Query: 116 DGQGDATVPVAARELSYRDDYFDM-PADSPAHRLPPGSGFAGFRFQESRLADQSRKDWRK 174 DG+ A EL+Y F+ + +P GFAGFR D R Sbjct: 119 DGK--------AVELAYDPAMFNYGKSGLKGAEMPKDLGFAGFRVNFH--TDLVR----- 163 Query: 175 NDWVAFLGASYFRAIGDLYQYGLSARGIAIDVAQADRPEEFPDFTQFFFEPQAPGSETVV 234 D AFLGASYFRA+G +QYGLSARG+AID +RPEEFP F++F+ E A S +V Sbjct: 164 -DITAFLGASYFRAVGGEWQYGLSARGLAIDCGM-ERPEEFPRFSEFWLERPAKQSSHLV 221 Query: 235 VYALLDGPSITGAYRFALQRGAGVGMEIDKALFLRRDVARLGLAPTTSMYWFSETVKGTG 294 VYALLD PSI+GAYRF + GA M++D AL+ R+ + R+G+AP TSM+ E + Sbjct: 222 VYALLDSPSISGAYRFEIAPGATTLMDVDVALYPRKTIERMGIAPLTSMFQMGENDRRIS 281 Query: 295 VDWRPEVHDSDGLAIWSGAGEHLWRPLNNPPRTMASAFGDQHLRGFGLLQRDRDFDHYL- 353 DWRPE+HDSDGL +W+G GE +WRPL NP +A+ D++ RGFGL+QRDR+FDHY Sbjct: 282 NDWRPEIHDSDGLEMWTGNGEWIWRPLLNPEHLRFNAYADENPRGFGLMQRDRNFDHYQD 341 Query: 354 DGVHYERRPSLWVEPLGDWGEGAVQLIELRTDDEIHDNIVAMWVPKAPARAGNSYRLRYR 413 DGV Y+RRPSLWVEP WG+G+VQL+E+ T DE DNIVA W P+A + G Y+ Sbjct: 342 DGVFYDRRPSLWVEPKAGWGKGSVQLVEIPTVDETFDNIVAFWNPEAKPQPGQELLYGYK 401 Query: 414 LYWQKDEPFPTPLARCVATRLGRGGQPGQARPQQVRKFMVEFKGAPLENLPFGVKPEAVI 473 L+W P+ A VATR G GG G+ R +F V+F G L VK VI Sbjct: 402 LHWGAKMPYAPKAATVVATRTGVGGVIGKKRTYFSWRFAVDFAGGDFALLGKDVKVVPVI 461 Query: 474 TASRGSISYVYTEALPNGVAGHWRAQFDLTA--DGQEPVELRLFLRHQGQALSETWLFQY 531 +A+ G++ T A P +RA FDL + + P++LRL+L GQ LSETWL+Q+ Sbjct: 462 SATHGTVE--ITSARPLHDIKGYRAIFDLKVGDEVKGPIDLRLYLAADGQPLSETWLYQW 519 Query: 532 HP 533 P Sbjct: 520 TP 521 >gi|152980965|ref|YP_001355204.1| glucan biosynthesis protein G [Janthinobacterium sp. Marseille] Length = 510 Score = 331 bits (849), Expect = 5e-92, Method: Compositional matrix adjust. Identities = 199/500 (39%), Positives = 274/500 (54%), Gaps = 29/500 (5%) Query: 37 AQPFSFEQLIARARDMARTPYQAPPAVPAAILDQIDYDAHGKIHFKTDLAVFAQGPGAFP 96 A F F + +A+ ++ T Y+AP + L+ ++YD + I FK + A + F Sbjct: 28 ALAFEFNDVAKKAQQLSTTSYKAPQRNISKALESLNYDQYRDIRFKPERAYWHAEKLPFE 87 Query: 97 LTFFHLGKFFRVPVRMFILDGQGDATVPVAARELSYRDDYFDMPADSPAHRLPPGS---- 152 LTFFH G+ F PVR+ + GQ +P R +Y A++L P Sbjct: 88 LTFFHQGRQFESPVRINEIVGQRARQIPFDPRAFNY-----------GANKLSPHDLKHL 136 Query: 153 GFAGFRFQESRLADQSRKDWRKNDWVAFLGASYFRAIGDLYQYGLSARGIAIDVAQADRP 212 G++GFR A + K K++ + FLGASY RA+G YGLSARG+A+D A + Sbjct: 137 GYSGFRVH---YAINTPK--YKDEIMVFLGASYLRAVGKGQIYGLSARGLAVDTA-LNSG 190 Query: 213 EEFPDFTQFFFEPQAPGSETVVVYALLDGPSITGAYRFALQRGAGVGMEIDKALFLRRDV 272 EEFP F +F+ E + S+ + +YALLD +TGAYRF ++ G E+ L+LR +V Sbjct: 191 EEFPKFVEFWIERPSANSKQLTIYALLDSRRVTGAYRFVVKPGEQTVTEVKSQLYLRENV 250 Query: 273 ARLGLAPTTSMYWFSETVKGTGVDWRPEVHDSDGLAIWSGAGEHLWRPLNNPPRTMASAF 332 +LG+AP TSMY+F E + T D+RPEVHDSDGL+I SG GE +WRPL NP R + +++ Sbjct: 251 TKLGIAPLTSMYFFGENQRSTTEDYRPEVHDSDGLSIQSGTGEWIWRPLVNPKRLLVTSY 310 Query: 333 GDQHLRGFGLLQRDRDFDHYLD-GVHYERRPSLWVEPLGDWGEGAVQLIELRTDDEIHDN 391 G + GFGL+QRD Y D YE RPS WVEP+G WG G V+L+++ T DE +DN Sbjct: 311 GLSNPSGFGLMQRDERQSSYEDLESRYETRPSAWVEPIGKWGSGRVELVQIPTPDEFNDN 370 Query: 392 IVAMWVPKAPARAGNSYRLRYRLYWQKDEPFPTPLARCVATRLGRGGQPGQARPQQVRKF 451 IVA WVP + G +L YRLYW K PL+ TR G G +P Sbjct: 371 IVAYWVPDVIPKPGTPIKLDYRLYWNKSAQQRPPLSWVTQTRRGHG---HLRKPDDSTAL 427 Query: 452 MVEFKGAPLENLPFGVKPEAVITA-SRGSISYVYTEALPNGVAGHWRAQFDLT-ADGQEP 509 V+F+G + LP K E +A S G I +T N G WRA + D ++P Sbjct: 428 FVDFEGPIFKKLPQDAKIEFRASADSNGEILEAHT--YRNEATGGWRAALRVKRVDDKKP 485 Query: 510 VELRLFLRHQGQALSETWLF 529 +ELR FL LSETW + Sbjct: 486 IELRGFLHTNNTTLSETWSY 505 Database: BlastDatabases/707/707 Posted date: Apr 13, 2011 12:58 PM Number of letters in database: 1,221,021 Number of sequences in database: 3697 Lambda K H 0.323 0.139 0.440 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 3697 Number of Hits to DB: 1,376,180 Number of extensions: 63228 Number of successful extensions: 140 Number of sequences better than 1.0e-08: 2 Number of HSP's gapped: 132 Number of HSP's successfully gapped: 2 Length of query: 540 Length of database: 1,221,021 Length adjustment: 88 Effective length of query: 452 Effective length of database: 895,685 Effective search space: 404849620 Effective search space used: 404849620 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.5 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.9 bits) S2: 132 (55.5 bits)