BLASTP 2.2.18 [Mar-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0001.3820.p
         (604 letters)

Database: BlastDatabases/707/707 
           3697 sequences; 1,221,021 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|152980999|ref|YP_001351921.1| peptidase M61 [Janthinobacteriu...   835   0.0  

>gi|152980999|ref|YP_001351921.1| peptidase M61 [Janthinobacterium
           sp. Marseille]
          Length = 599

 Score =  835 bits (2158), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 408/593 (68%), Positives = 473/593 (79%), Gaps = 3/593 (0%)

Query: 7   IRYSITSLDPASHLYDITVTVDTPAADGQVFSLPAWIPGSYMIREFGKNIVTLRGESNGR 66
           I+Y+I   D A+HL+ ++VTV+ P   GQ FSLPAWIPGSYMIREF +NIV +R ES G 
Sbjct: 5   IQYTIVPKDLAAHLFAVSVTVNQPDPAGQRFSLPAWIPGSYMIREFARNIVRIRAESGGY 64

Query: 67  KVAVKKRDKHTWQAAPCKGALTLHYQVYAWDLSVRTAHLDRTHGFFNGTSVFLAAHGFED 126
           +VA+ K DKHTW A  C G LTLHY+VYAWDLSVRTAHLD+THGFFNGTSVFL   G E 
Sbjct: 65  EVALNKLDKHTWLADVCSGPLTLHYEVYAWDLSVRTAHLDQTHGFFNGTSVFLQVDGQEQ 124

Query: 127 GPHVVDIRRPAGEDFKRWRVATAMSELKAKRYGFGTYVAQNYDELIDHPVELGDFALASF 186
             H VDI++P GE + +WRVATAM +LKAKRYGFG+Y+A NYDELIDHPVELG FALASF
Sbjct: 125 RVHEVDIQKPQGEAYAKWRVATAMRQLKAKRYGFGSYIASNYDELIDHPVELGTFALASF 184

Query: 187 QAHGVPHDVVITGRVPNLDLARLCDDLKKICEAQIAFFEPRSKRAPMDRYVFMTLAVGDG 246
           +AHGV HD+V TGRVPNLDL RL  DL+KICEAQI+ FEP+++RAP+DRYVFMT+ VGDG
Sbjct: 185 KAHGVQHDMVFTGRVPNLDLPRLGADLQKICEAQISLFEPKTQRAPVDRYVFMTMVVGDG 244

Query: 247 YGGLEHRASTALICARADLPVKGKPEQSDGYRTYLGLCSHEYFHTWNVKRIKPAVFAPYD 306
           YGGLEHRASTALIC+RADLPVKG+ E +DGYRT+LGLCSHEYFHTWNVKRIKPA FAPYD
Sbjct: 245 YGGLEHRASTALICSRADLPVKGQKEMTDGYRTFLGLCSHEYFHTWNVKRIKPAAFAPYD 304

Query: 307 LRQENYTSLLWLFEGFTSYYDDLFLVRTGVIDTEQYLKLVGKTITGVLRGTGRKKQSVAE 366
           L QE YT LLWLFEGFTSYYDDL LVR+GVID   YLK V KTI  VLRG+GR KQSVAE
Sbjct: 305 LTQEGYTPLLWLFEGFTSYYDDLMLVRSGVIDEAAYLKQVAKTINNVLRGSGRHKQSVAE 364

Query: 367 SSFDAWVKYYRQDENASNAIVSYYTKGSLVALGLDLSICEQTRGRRSLDDVMRGLWTRYG 426
           SSFDAWVKYYRQDENA+NAIVSYYTKGSLV L LDL+I EQTRG++SLDDVM+ LW +YG
Sbjct: 365 SSFDAWVKYYRQDENATNAIVSYYTKGSLVGLALDLTIREQTRGKKSLDDVMQALWQQYG 424

Query: 427 RDFYH-GKQ-QGVAEDEILAVMEELSGADLKRFYDRHIRGTEDVPLEDLLPAFGVAYDAC 484
           RDFY  GK  +GV E E+ A+ + ++G  LKR  DR +RGTED+PL  LL  FGV +   
Sbjct: 425 RDFYQDGKAGRGVTEAEVDALFDSVTGLKLKRVLDRWVRGTEDIPLAKLLAPFGVDFSDA 484

Query: 485 LPADAKPWLGARIGKEGGDAKLAAVYEGGPAMQAGLSAGDKLVAIDGLRVPASGADGLLA 544
              +AKP LG R  ++G D K+A+VYEGG A +AGLSAGD LVAIDGLRV A+  D LL 
Sbjct: 485 -RKNAKPGLGLRTVRDGNDCKVASVYEGGAAHKAGLSAGDVLVAIDGLRVSATNLDSLLG 543

Query: 545 RYRLNDTVRIHAFRRDELMEFSVRLKADSAPQVSLSAMGKPVAVVRRRLAWLQ 597
           RYR+  T+ +HAFRRDELM F+  L     P V+L++  KPVA +R R AWL 
Sbjct: 544 RYRVGQTIGVHAFRRDELMIFNAVLAPSDVPAVTLTSADKPVAALRLRQAWLN 596


  Database: BlastDatabases/707/707
    Posted date:  Apr 13, 2011 12:58 PM
  Number of letters in database: 1,221,021
  Number of sequences in database:  3697
  
Lambda     K      H
   0.321    0.138    0.422 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 3697
Number of Hits to DB: 1,571,723
Number of extensions: 70943
Number of successful extensions: 182
Number of sequences better than 1.0e-08: 1
Number of HSP's gapped: 180
Number of HSP's successfully gapped: 1
Length of query: 604
Length of database: 1,221,021
Length adjustment: 89
Effective length of query: 515
Effective length of database: 891,988
Effective search space: 459373820
Effective search space used: 459373820
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 132 (55.5 bits)