BLASTP 2.2.18 [Mar-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0001.3808.p
         (291 letters)

Database: BlastDatabases/707/707 
           3697 sequences; 1,221,021 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|152981538|ref|YP_001354807.1| 7-cyano-7-deazaguanine reductas...   402   e-113

>gi|152981538|ref|YP_001354807.1| 7-cyano-7-deazaguanine reductase
           [Janthinobacterium sp. Marseille]
          Length = 279

 Score =  402 bits (1034), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 196/278 (70%), Positives = 221/278 (79%), Gaps = 4/278 (1%)

Query: 14  SPESSPLGKSSPYPTHYDPSLLFPIPRAPKRAELQISGTLPFFGADFWTAYEISWLNLRG 73
           SP++SPLGK S Y T YDPSLLFPIPR  KR EL +SG LPFFG D W AYE+SWLN+RG
Sbjct: 6   SPDASPLGKPSVYQTQYDPSLLFPIPRQGKRDELGLSGDLPFFGVDIWNAYELSWLNMRG 65

Query: 74  KPQIAIASFMVPADSPNIIESKSFKLYLNSFNQERLESSAQLLDKLRTDLSAAAGANVQV 133
           KPQ+AIA  MVPADSPNI+ESKSFKLYLNSFNQ +L  +  LL+ LR DLSA  GA VQ+
Sbjct: 66  KPQVAIARIMVPADSPNIVESKSFKLYLNSFNQTKLGGTDALLELLRADLSAGFGAPVQI 125

Query: 134 SLTESAQFGQVQFGELSGLLLDRLDVDIEPVSGNPHPDGSQLRANTDEATVEETLVSHLL 193
           +LT    F ++  GEL G+LLDRLD+++        PD S L+A  D+A VEETL+S+LL
Sbjct: 126 TLTLPEDFVKINIGELDGMLLDRLDIEVTDYV----PDPSLLQAAHDDAPVEETLLSNLL 181

Query: 194 KSNCPVTSQPDWGSVQIHYVGAPIDQERLLKYIIGFREHNEFHEQCVERIFTDILRHCKP 253
           KSNC VT QPDWGSVQIHYVG  I+Q  LL Y+IGFREHNEFHEQCVERIF DILR CKP
Sbjct: 182 KSNCLVTGQPDWGSVQIHYVGPQINQAGLLHYLIGFREHNEFHEQCVERIFMDILRQCKP 241

Query: 254 QKLAVYARYTRRGGLDINPWRSNFSSAKPPSQLRNARQ 291
           QKLAVYARYTRRGGLDINPWRSNFS+ KPPS  RNARQ
Sbjct: 242 QKLAVYARYTRRGGLDINPWRSNFSTGKPPSNARNARQ 279


  Database: BlastDatabases/707/707
    Posted date:  Apr 13, 2011 12:58 PM
  Number of letters in database: 1,221,021
  Number of sequences in database:  3697
  
Lambda     K      H
   0.316    0.133    0.400 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 3697
Number of Hits to DB: 706,620
Number of extensions: 29315
Number of successful extensions: 68
Number of sequences better than 1.0e-08: 1
Number of HSP's gapped: 67
Number of HSP's successfully gapped: 1
Length of query: 291
Length of database: 1,221,021
Length adjustment: 82
Effective length of query: 209
Effective length of database: 917,867
Effective search space: 191834203
Effective search space used: 191834203
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 129 (54.3 bits)