BLASTP 2.2.18 [Mar-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0001.3795.p
         (191 letters)

Database: BlastDatabases/707/707 
           3697 sequences; 1,221,021 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|152980185|ref|YP_001351924.1| anthranilate synthase component...   341   2e-95
gi|152980732|ref|YP_001353933.1| carbamoylphosphate synthase sma...    57   6e-10

>gi|152980185|ref|YP_001351924.1| anthranilate synthase component II
           [Janthinobacterium sp. Marseille]
          Length = 187

 Score =  341 bits (874), Expect = 2e-95,   Method: Compositional matrix adjust.
 Identities = 157/186 (84%), Positives = 174/186 (93%)

Query: 1   MLLMIDNYDSFTYNLVQYFGELGEEVLTIRNDEITLDDIRKLNPERICLSPGPCSPKEAG 60
           MLLMIDNYDSFTYNLVQYFGELGE+V T+RNDEITL+ I  LNPERIC+SPGPC+P EAG
Sbjct: 1   MLLMIDNYDSFTYNLVQYFGELGEDVHTVRNDEITLEQIAALNPERICISPGPCTPHEAG 60

Query: 61  ICVDLLKEFSGKLPILGVCLGHQAIGEAFGGNIIRAKQVMHGKTSKIAHTGVGVFKDLPS 120
           + V +L++F+GKLPILGVCLGHQAIG AFGG ++RA+QVMHGKTS+I HTGVGVFKDLPS
Sbjct: 61  VSVPILQQFAGKLPILGVCLGHQAIGAAFGGKVVRAQQVMHGKTSQITHTGVGVFKDLPS 120

Query: 121 PYTVIRYHSLAIDRATLPDCLEVTAWTDDGEIMGVRHKQFDLQGVQFHPESILSEHGHAL 180
           PYTVIRYHSLAI+RA+LPDCLEVTAWTDDGEIMGVRHK FD+QGVQFHPESILSEHGHAL
Sbjct: 121 PYTVIRYHSLAIERASLPDCLEVTAWTDDGEIMGVRHKDFDIQGVQFHPESILSEHGHAL 180

Query: 181 LKNFLT 186
           LKNFL 
Sbjct: 181 LKNFLV 186


>gi|152980732|ref|YP_001353933.1| carbamoylphosphate synthase small
           subunit [Janthinobacterium sp. Marseille]
          Length = 384

 Score = 57.4 bits (137), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 49/173 (28%), Positives = 76/173 (43%), Gaps = 13/173 (7%)

Query: 13  YNLVQYFGELGEEVLTIRNDEITLDDIRKLNPERICLSPGPCSPKEAGICVDLLKEFSGK 72
           +N+++   + G +V T+   + +  +   LNP+ I LS GP  P+     +   KE   +
Sbjct: 207 FNILRMLAQRGCKV-TVLPAQASAAEALALNPDGIFLSNGPGDPEPCDYAIAASKELIDR 265

Query: 73  -LPILGVCLGHQAIGEAFGGNIIRAKQVMHGKTSKIAHTGVGVFKDLPSPYTVI--RYHS 129
            +P  G+CLGHQ +  A G   ++ K   HG    +        +DL S   +I  + H 
Sbjct: 266 GIPTFGICLGHQIMALASGAKTLKMKFGHHGANHPV--------QDLDSKKVLITSQNHG 317

Query: 130 LAIDRATLP-DCLEVTAWTDDGEIMGVRHKQFDLQGVQFHPESILSEHGHALL 181
            A+D ATLP +C        DG + G           Q HPE+    H  A L
Sbjct: 318 FAVDAATLPVNCRVTHVSLFDGSLQGFERTDKPAFCFQGHPEASPGPHDIAPL 370


  Database: BlastDatabases/707/707
    Posted date:  Apr 13, 2011 12:58 PM
  Number of letters in database: 1,221,021
  Number of sequences in database:  3697
  
Lambda     K      H
   0.321    0.141    0.431 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 3697
Number of Hits to DB: 470,469
Number of extensions: 19425
Number of successful extensions: 46
Number of sequences better than 1.0e-08: 2
Number of HSP's gapped: 45
Number of HSP's successfully gapped: 2
Length of query: 191
Length of database: 1,221,021
Length adjustment: 78
Effective length of query: 113
Effective length of database: 932,655
Effective search space: 105390015
Effective search space used: 105390015
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 127 (53.5 bits)