BLASTP 2.2.18 [Mar-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0001.3793.p
         (226 letters)

Database: BlastDatabases/707/707 
           3697 sequences; 1,221,021 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|152981574|ref|YP_001351926.1| phosphoglycolate phosphatase [J...   313   5e-87
gi|152981556|ref|YP_001354369.1| phosphoglycolate phosphatase [J...    90   1e-19
gi|152981553|ref|YP_001353038.1| phosphoglycolate phosphatase [J...    59   2e-10

>gi|152981574|ref|YP_001351926.1| phosphoglycolate phosphatase
           [Janthinobacterium sp. Marseille]
          Length = 223

 Score =  313 bits (803), Expect = 5e-87,   Method: Compositional matrix adjust.
 Identities = 142/221 (64%), Positives = 178/221 (80%)

Query: 4   LTNIKAAIIDLDGTMLDTAADFHVAVNRMREELGLTPLSQETIVNFVGKGTENLIRRVLA 63
           L  I+  IIDLDGTML TA D H+A+NRMR  LGL PL  +T ++FVGKG ENL+R+ + 
Sbjct: 2   LHGIRGVIIDLDGTMLHTAQDLHIAINRMRAGLGLAPLDLDTAISFVGKGAENLVRKTIG 61

Query: 64  VDYAEDEAAQYFQQALESYTEHYLAINGDYSSLYPGVLEGLQALRGKGLRLACVTNKPLA 123
           VD+++ E  Q F +A+  + +HY  +NG++++ YPGV EGLQ ++ KGLRLACVTNKP+A
Sbjct: 62  VDFSDSEVEQRFAEAMALFEQHYFDVNGEFATAYPGVHEGLQEMQAKGLRLACVTNKPIA 121

Query: 124 FAVPLLQKKGLRDFFEIVYGGDSFPKKKPDPMPLLQVCQDFGLEPAQVVAIGDSSNDAQA 183
           F +PLL+K GL D+FEI+YGGDSF KKKPDPM LLQVC DF L PAQ+VAIGDS ND+QA
Sbjct: 122 FTLPLLKKTGLHDYFEIIYGGDSFAKKKPDPMQLLQVCADFELAPAQIVAIGDSINDSQA 181

Query: 184 ARAAGCRVLNVPYGYNHGESIHNVDSDGIVSTLVEAAQQIS 224
           ARAAGC+VL VPYGYNHG++I +VDSDGIVS+L+EAA  IS
Sbjct: 182 ARAAGCKVLAVPYGYNHGQAIQDVDSDGIVSSLLEAAHLIS 222


>gi|152981556|ref|YP_001354369.1| phosphoglycolate phosphatase
           [Janthinobacterium sp. Marseille]
          Length = 219

 Score = 90.1 bits (222), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 69/223 (30%), Positives = 102/223 (45%), Gaps = 13/223 (5%)

Query: 3   NLTNIKAAIIDLDGTMLDTAADFHVAVNRMREELGLTPLSQETIVNFVGKGTENLIRRVL 62
            L   +A + DLDGT+ DTA D   AVN++R   GL P   E +      G   LI    
Sbjct: 2   KLRTPQAILFDLDGTLADTAPDLAGAVNQLRIARGLEPTDYELLRPTASAGARGLIGAAF 61

Query: 63  AVDYAEDEAAQYFQQALESYTEHYLAINGDYSSLYPGVLEGLQALRGKGLRLACVTNKPL 122
            +   + E  +     L++Y E  +A+    S L+ GV E L  L+ +G+    VTNK  
Sbjct: 62  GLTPQDAEYPELRDAFLKNY-EQSIAVE---SRLFDGVTELLAQLQAEGIVWGIVTNKVS 117

Query: 123 AFAVPLLQKKGLRDFFEIVYGGDSFPKKKPDPMPLLQVCQDFGLEPAQVVAIGDSSNDAQ 182
                L+ + GL D    V  GD+    KP P PL +  +  G++P     +GD   D Q
Sbjct: 118 YLTDRLVPQIGL-DHAACVISGDTASHPKPHPAPLFEAAKRIGIDPEHCWYVGDDLRDIQ 176

Query: 183 AARAAGCRVLNVPYGY--NHGESIHNVDSDGIVSTLVEAAQQI 223
           A +AAG   +   +GY  N   +  N D+      L E+ +Q+
Sbjct: 177 AGQAAGMTTIAAGWGYCGNIAPASWNADA------LAESPEQL 213


>gi|152981553|ref|YP_001353038.1| phosphoglycolate phosphatase
           [Janthinobacterium sp. Marseille]
          Length = 219

 Score = 58.9 bits (141), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 50/189 (26%), Positives = 87/189 (46%), Gaps = 11/189 (5%)

Query: 11  IIDLDGTMLDTAADFHVAVNRMREELGLTPLSQETIVNFVGKGTENLIRRVL-AVDYAED 69
           + D DGT++D+ A     +    ++LGL    ++   + +G   +  +   L  +D    
Sbjct: 10  VFDWDGTLMDSTAVIVNCIQAAAKDLGLPIPGEKAAAHVIGLSLQKAMEAALPGID---- 65

Query: 70  EAAQYFQQALESYTEHYLAINGDYSSLYPGVLEGLQALRGKGLRLACVTNKPLAFAVPLL 129
              +Y+ + +E Y  HYL  +G  + L+ GV E L+ L  +G  LA  T K        L
Sbjct: 66  --PKYYPRMVERYRYHYLNQDGGLT-LFKGVREMLEDLSQQGYFLAVATGKSRVGLNRAL 122

Query: 130 QKKGLRDFFEIVYGGD-SFPKKKPDPMPLLQVCQDFGLEPAQVVAIGDSSNDAQAARAAG 188
               L   F+     D +F   KP P  L ++ ++ G +  + V +GD+++D   A+ AG
Sbjct: 123 DVSKLLSLFDATRCADETF--SKPHPAMLQELTRELGQDMKRTVMVGDTTHDLLLAQNAG 180

Query: 189 CRVLNVPYG 197
              + V YG
Sbjct: 181 AAGVAVHYG 189


  Database: BlastDatabases/707/707
    Posted date:  Apr 13, 2011 12:58 PM
  Number of letters in database: 1,221,021
  Number of sequences in database:  3697
  
Lambda     K      H
   0.318    0.136    0.389 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 3697
Number of Hits to DB: 521,663
Number of extensions: 21024
Number of successful extensions: 65
Number of sequences better than 1.0e-08: 3
Number of HSP's gapped: 63
Number of HSP's successfully gapped: 3
Length of query: 226
Length of database: 1,221,021
Length adjustment: 80
Effective length of query: 146
Effective length of database: 925,261
Effective search space: 135088106
Effective search space used: 135088106
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 128 (53.9 bits)