BLASTP 2.2.18 [Mar-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0001.3787.p
         (258 letters)

Database: BlastDatabases/707/707 
           3697 sequences; 1,221,021 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|152980360|ref|YP_001351930.1| enoyl-CoA hydratase [Janthinoba...   410   e-116
gi|152982214|ref|YP_001353072.1| enoyl-CoA hydratase [Janthinoba...    99   4e-22

>gi|152980360|ref|YP_001351930.1| enoyl-CoA hydratase
           [Janthinobacterium sp. Marseille]
          Length = 258

 Score =  410 bits (1054), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 198/258 (76%), Positives = 221/258 (85%)

Query: 1   MSYENILVETHDKVGLIRLNRPKALNALNDALMIELGQALLAFDAQDEIGCIIVTGSEKA 60
           M YENILVE H KVG+I LNRP ALNALND LM ELG AL +FD  D+IGC+I+TGSEKA
Sbjct: 1   MQYENILVEIHGKVGVITLNRPAALNALNDKLMDELGLALQSFDGDDDIGCMIITGSEKA 60

Query: 61  FAAGADISVMAGYDYMDVFNGEFITRNWETLRRIRKPVIAAVAGYALGGGCELAMMCDFI 120
           FAAGADI  MA Y YMDV+ G++ITRNWE +R +RKPVIAAVAGYALGGGCELAMMCDFI
Sbjct: 61  FAAGADIGAMATYTYMDVYKGDYITRNWEQIRSVRKPVIAAVAGYALGGGCELAMMCDFI 120

Query: 121 IAADNAKFGQPEIKLGIIPGAGGTQRLPRAVSKAKAMDLALTARMMDAQEAERAGLVSRV 180
           IAAD AKFGQPEIKLGIIPGAGGTQRLPRAVSK+KAMDL LTARMMDA EAERAGLVSRV
Sbjct: 121 IAADTAKFGQPEIKLGIIPGAGGTQRLPRAVSKSKAMDLCLTARMMDAAEAERAGLVSRV 180

Query: 181 VPADKLMEEAMAAAVTITEMPRQVAMMVKDSVNRAYESTLTEGIKYERALFYSCFATEDQ 240
           V ADKL EEA+AAA  I  M   + MMVK+S+NRAYE+TL EG+++ER LF+S FAT DQ
Sbjct: 181 VAADKLHEEALAAATVIANMSLPMVMMVKESINRAYETTLAEGVQFERRLFHSTFATADQ 240

Query: 241 KEGMKAFLEKRPAVFKNA 258
           KEGM+AF+EKR A FKN+
Sbjct: 241 KEGMQAFIEKRAAHFKNS 258


>gi|152982214|ref|YP_001353072.1| enoyl-CoA hydratase
           [Janthinobacterium sp. Marseille]
          Length = 269

 Score = 98.6 bits (244), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 76/260 (29%), Positives = 128/260 (49%), Gaps = 5/260 (1%)

Query: 1   MSYENILVETHDKVGLIRLNRPKALNALNDALMIELGQALLAFDAQDEIGCIIVTGSEKA 60
           MS E I    H+   ++ ++ P A NAL+  +     + L   +  D I  +I+TG++  
Sbjct: 11  MSAE-IQASRHEATLILTISNPGAKNALHPDMFAAAVEVLSTAERDDSIRAVILTGADNF 69

Query: 61  FAAGADISVMAGYDYMDVFN-GEFIT--RNW-ETLRRIRKPVIAAVAGYALGGGCELAMM 116
           F AG +++ +  +  +D    G+ +   R+W E +R   KPVIAAV G A G G  LA+ 
Sbjct: 70  FCAGGNLNKLLEHRAIDKSQQGDAVDSLRSWIEAIRDCPKPVIAAVEGAAAGAGFSLALA 129

Query: 117 CDFIIAADNAKFGQPEIKLGIIPGAGGTQRLPRAVSKAKAMDLALTARMMDAQEAERAGL 176
           CD I+A +N+KF     ++G+ P  G +  L +A+ +  A ++ L  + + A      GL
Sbjct: 130 CDLIVAGNNSKFAMSYSRVGLTPDGGASWFLTQALPRQLATEILLEGKAVAATRLHELGL 189

Query: 177 VSRVVPADKLMEEAMAAAVTITEMPRQVAMMVKDSVNRAYESTLTEGIKYERALFYSCFA 236
           ++R+V     ++ A   A  + E+       +K  V     +TL +  + E+  F     
Sbjct: 190 INRLVADGTTLDAAQQWADELAELSGHAVERIKSLVREGGSNTLAQHFESEKFHFVESLN 249

Query: 237 TEDQKEGMKAFLEKRPAVFK 256
             D  EG+ AFLEKR   +K
Sbjct: 250 HRDALEGINAFLEKRKPHYK 269


  Database: BlastDatabases/707/707
    Posted date:  Apr 13, 2011 12:58 PM
  Number of letters in database: 1,221,021
  Number of sequences in database:  3697
  
Lambda     K      H
   0.321    0.134    0.378 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 3697
Number of Hits to DB: 567,728
Number of extensions: 22551
Number of successful extensions: 77
Number of sequences better than 1.0e-08: 3
Number of HSP's gapped: 74
Number of HSP's successfully gapped: 3
Length of query: 258
Length of database: 1,221,021
Length adjustment: 81
Effective length of query: 177
Effective length of database: 921,564
Effective search space: 163116828
Effective search space used: 163116828
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 128 (53.9 bits)