BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0001.3771.p (397 letters) Database: BlastDatabases/707/707 3697 sequences; 1,221,021 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gi|152980560|ref|YP_001351963.1| hippurate hydrolase [Janthinoba... 646 0.0 gi|152980363|ref|YP_001355026.1| hippurate hydrolase [Janthinoba... 369 e-103 >gi|152980560|ref|YP_001351963.1| hippurate hydrolase [Janthinobacterium sp. Marseille] Length = 396 Score = 646 bits (1666), Expect = 0.0, Method: Compositional matrix adjust. Identities = 303/395 (76%), Positives = 342/395 (86%) Query: 1 MKLIDPIVQFQSELQQIRRDIHAHPELAYEEVRTADVVAQKLTEWGIPVVRGLGVTGVVG 60 MKLIDPI+QF +E+Q IRR+IHAHPEL +EE TA++VA+KLTEWGIPVVRGLGVTGVVG Sbjct: 1 MKLIDPIIQFHNEIQAIRREIHAHPELCFEEHDTAELVAKKLTEWGIPVVRGLGVTGVVG 60 Query: 61 IIKQGDSPRAIGLRADMDALPMPEINTFAHASRHAGKMHACGHDGHTAMLLGAAYYLARH 120 I+K G S RAIGLRADMDALP+ E+NTFAHAS++ GKMHACGHDGHTAMLLGAA+YL+++ Sbjct: 61 ILKNGSSQRAIGLRADMDALPILELNTFAHASQNKGKMHACGHDGHTAMLLGAAHYLSQN 120 Query: 121 RNFDGTVYVIFQPAEEGGRGAERMIQDGLFEQYPMDAVFGMHNWPGIPAGHFGVTPGAQM 180 +NFDGT+Y+IFQPAEEGG GA+RM+ +GLFEQ+PM+AVFGMHNWPGIP GHFGVTPG M Sbjct: 121 KNFDGTIYLIFQPAEEGGGGAKRMMDEGLFEQFPMEAVFGMHNWPGIPVGHFGVTPGPMM 180 Query: 181 ASSNEFHVTVKGRGSHAAQPHKAADPVMTAVHIAQAWQSIVARNINPNDPAVVSITQIHT 240 ASSNEF V V G+G+HAAQPHK DP+M AV IAQ+WQ+I+ RN +P D A +SITQIH Sbjct: 181 ASSNEFEVVVSGKGAHAAQPHKGIDPIMVAVQIAQSWQTIITRNKSPIDAAALSITQIHA 240 Query: 241 GSATNVIPDEAMMVGTVRTFSLPVLDLIERRMKEIAEHTAAAFDATVDFRFNRNYPPLIN 300 GS TNVIPD+A +VGTVRTF L VLDLIE RM+ IAEHTA AFDA V F F RNYPPLIN Sbjct: 241 GSTTNVIPDDATLVGTVRTFDLKVLDLIETRMRNIAEHTAEAFDAKVSFHFKRNYPPLIN 300 Query: 301 HAKETAFAVEVLTEQFGADRVDAHTEPTMGAEDFAFMLQHKPGCYVFLGNGDGGHRDQGH 360 H KETAFAVEVL GA VDA EPTMGAEDFAFMLQ KPGCYVF+GNG+G HR GH Sbjct: 301 HPKETAFAVEVLQGIVGAGHVDAQVEPTMGAEDFAFMLQGKPGCYVFIGNGEGDHRSAGH 360 Query: 361 GLGPCNLHNPSYDFNDDLLPIGATYWVRLAEKFLQ 395 GLGPCNLHNPSYDFNDDLLPIGATYWVRLAE FL+ Sbjct: 361 GLGPCNLHNPSYDFNDDLLPIGATYWVRLAESFLK 395 >gi|152980363|ref|YP_001355026.1| hippurate hydrolase [Janthinobacterium sp. Marseille] Length = 398 Score = 369 bits (946), Expect = e-103, Method: Compositional matrix adjust. Identities = 186/385 (48%), Positives = 247/385 (64%), Gaps = 10/385 (2%) Query: 12 SELQQIRRDIHAHPELAYEEVRTADVVAQKLTEWGIPVVRGLGVTGVVGIIKQGDSPRAI 71 +++ + R HA PELA+EEV TA +VA L E GI V G+G TGVVG +K+GD P+ I Sbjct: 9 ADMIKWRHTFHASPELAFEEVSTAQLVASVLRENGIAVEEGVGRTGVVGTLKRGDGPK-I 67 Query: 72 GLRADMDALPMPEINTFAHASRHAGKMHACGHDGHTAMLLGAAYYLARHRNFDGTVYVIF 131 GLRADMDALP+ E N FAH S+H GKMHACGHDGHTAMLLGAA L+++ + GT+ IF Sbjct: 68 GLRADMDALPLSEKNDFAHKSQHEGKMHACGHDGHTAMLLGAAVALSKNTEWTGTINFIF 127 Query: 132 QPAEEGGRGAERMIQDGLFEQYPMDAVFGMHNWPGIPAGHFGVTPGAQMASSNEFHVTVK 191 QPAEE G MI+DGLFE++P D VFGMHNWPG+ G F + G MAS + F +T++ Sbjct: 128 QPAEEAAGGGRVMIEDGLFERFPCDMVFGMHNWPGVQMGRFAINHGPMMASFDTFEITIQ 187 Query: 192 GRGSHAAQPHKAADPVMTAVHIAQAWQSIVARNINPNDPAVVSITQIHTGSATNVIPDEA 251 G GSHAA P ++ D ++ A + A Q+IV+R + P + AVVS+TQIH G A NV+PD A Sbjct: 188 GVGSHAAMPERSIDSLVCASQLVLALQTIVSRRLPPQETAVVSVTQIHGGEAWNVLPDTA 247 Query: 252 MMVGTVRTFSLPVLDLIERRMKEIAEHTAAAFDATVDFRFNRNYPPLINHAKETAFAVEV 311 ++ GTVR FS I + EI+ A + A+ + YP IN +ET A+ Sbjct: 248 VIRGTVRCFSASTQQRIHDLLTEISGGIAQSNGASATVSYRYAYPATINSHQETDIAIRA 307 Query: 312 LTEQFGADRVDAHTEPTMGAEDFAFMLQHKPGCYVFLGNGDGGHRDQGHGLGPCNLHNPS 371 + G D+VD P+M +EDF+FML KPG Y+++G RD+ LHNP Sbjct: 308 ASAVVGKDKVDWDCVPSMASEDFSFMLNSKPGAYIWMGV----DRDE-----TIPLHNPH 358 Query: 372 YDFNDDLLPIGATYWVRLAEKFLQA 396 YDFNDD + +GA++W+ L + A Sbjct: 359 YDFNDDTIELGASFWIELVRDVMGA 383 Database: BlastDatabases/707/707 Posted date: Apr 13, 2011 12:58 PM Number of letters in database: 1,221,021 Number of sequences in database: 3697 Lambda K H 0.321 0.137 0.421 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 3697 Number of Hits to DB: 992,960 Number of extensions: 42946 Number of successful extensions: 103 Number of sequences better than 1.0e-08: 2 Number of HSP's gapped: 101 Number of HSP's successfully gapped: 2 Length of query: 397 Length of database: 1,221,021 Length adjustment: 85 Effective length of query: 312 Effective length of database: 906,776 Effective search space: 282914112 Effective search space used: 282914112 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.9 bits) S2: 130 (54.7 bits)