BLASTP 2.2.18 [Mar-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0001.3753.p
         (153 letters)

Database: BlastDatabases/707/707 
           3697 sequences; 1,221,021 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|152981695|ref|YP_001351983.1| OsmC-like protein [Janthinobact...   273   3e-75

>gi|152981695|ref|YP_001351983.1| OsmC-like protein
           [Janthinobacterium sp. Marseille]
          Length = 146

 Score =  273 bits (699), Expect = 3e-75,   Method: Compositional matrix adjust.
 Identities = 126/140 (90%), Positives = 135/140 (96%)

Query: 1   MECTVRWTGLSGMTFTAETGSGHLLTMDGAPDGGGRNLAPRPMEVVLAGTGGCTAYDVVV 60
           MECTVRWTGLSGMTF AETGSGH++ MDGAP+GGGRNLAPRPMEVVL GTGGCTAYDVVV
Sbjct: 1   MECTVRWTGLSGMTFLAETGSGHVVAMDGAPEGGGRNLAPRPMEVVLLGTGGCTAYDVVV 60

Query: 61  ILRKSGQDVRGCDVTLKSERAETDPKVFTKIHFHFTVRGRNLKTNVVERAIKLSHDKYCS 120
           ILRKSGQDVRGC+V+LKSERAETDPKVFTK+HFHFTV GRNLK NVVERAIKLSHDKYCS
Sbjct: 61  ILRKSGQDVRGCEVSLKSERAETDPKVFTKVHFHFTVTGRNLKANVVERAIKLSHDKYCS 120

Query: 121 ASIMLEKTAEMTHSFEIIDD 140
           ASIM+EKTAE+THSFEI+DD
Sbjct: 121 ASIMMEKTAEITHSFEIVDD 140


  Database: BlastDatabases/707/707
    Posted date:  Apr 13, 2011 12:58 PM
  Number of letters in database: 1,221,021
  Number of sequences in database:  3697
  
Lambda     K      H
   0.318    0.131    0.385 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 3697
Number of Hits to DB: 349,540
Number of extensions: 14138
Number of successful extensions: 28
Number of sequences better than 1.0e-08: 1
Number of HSP's gapped: 28
Number of HSP's successfully gapped: 1
Length of query: 153
Length of database: 1,221,021
Length adjustment: 76
Effective length of query: 77
Effective length of database: 940,049
Effective search space: 72383773
Effective search space used: 72383773
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 125 (52.8 bits)