BLASTP 2.2.18 [Mar-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0001.3738.p
         (373 letters)

Database: BlastDatabases/707/707 
           3697 sequences; 1,221,021 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|152980174|ref|YP_001352018.1| dioxygenase (alpha subunit) oxi...   645   0.0  

>gi|152980174|ref|YP_001352018.1| dioxygenase (alpha subunit)
           oxidoreductase protein [Janthinobacterium sp. Marseille]
          Length = 417

 Score =  645 bits (1664), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 298/366 (81%), Positives = 330/366 (90%)

Query: 1   MSDLATFAKLARSNAQLPVHVYFDEPLYQRELKQLFQHGPRYVGHELMVPNAGDYSTLPW 60
           MSDLA  AKLARSNAQLPV+VYFDE L ++E++QLF+ GPRY GHELMVPN GD++TL W
Sbjct: 52  MSDLANLAKLARSNAQLPVNVYFDEALLKQEIQQLFRAGPRYAGHELMVPNVGDFATLAW 111

Query: 61  ENEGRMLVRNAQGIELLSNVCRHRQAKMLDGRGNTNNVVCPLHRWTYDLKGELIGAPHFG 120
           ENEGRMLVR+ QGIELLSNVCRHRQAKM +GRG+  N+VCPLHRWTYDLKGELIGAPHFG
Sbjct: 112 ENEGRMLVRSQQGIELLSNVCRHRQAKMFNGRGHAKNIVCPLHRWTYDLKGELIGAPHFG 171

Query: 121 ETPCMNLSKTPLQSWNGLLFENNGVDIADKLKRLGVTRDLDFSGYLYDHTEVHECDYNWK 180
           ETPC+NLS TPLQSWNGLLFE NGV++A  L +LGVT+DLDFSGY+ DH EVHECDYNWK
Sbjct: 172 ETPCLNLSNTPLQSWNGLLFEQNGVNVAKILGKLGVTKDLDFSGYMLDHVEVHECDYNWK 231

Query: 181 TFIEVYLEDYHVEPFHPGLGNFVSCSDLKWEFGRDYSVQTVGVNHGLIKSGSPTYGKWQE 240
           TFIEVYLEDYHVEPFHPGLG+FVSC DLKWEFG +YSVQTVGV+H L KSGS  Y KWQE
Sbjct: 232 TFIEVYLEDYHVEPFHPGLGSFVSCDDLKWEFGDEYSVQTVGVHHALAKSGSEKYQKWQE 291

Query: 241 KLLQFSNGQPPKFGAIWLTLYPNIMVEWYPHVLVVSTLWPSGPQKTTNVVEFYYPEEIAL 300
           ++LQF NG+ P +GAIWLTLYPNIMVEWYPHVLVVST+WP+GPQKT NVVEFYYPEEI L
Sbjct: 292 QILQFRNGETPPYGAIWLTLYPNIMVEWYPHVLVVSTVWPNGPQKTRNVVEFYYPEEIVL 351

Query: 301 FERELVEAERAAYMETCVEDDEIAQRMDAGRRILMDRGTSEVGPYQSPMEDGMQHFHEWY 360
           FER+ V AERAAYMETC EDDEIA RMDAGR+IL+DRG +EVGPYQSPMEDGMQHFHEWY
Sbjct: 352 FERDFVAAERAAYMETCEEDDEIALRMDAGRKILLDRGENEVGPYQSPMEDGMQHFHEWY 411

Query: 361 RQQLDV 366
           R+QLDV
Sbjct: 412 RRQLDV 417


  Database: BlastDatabases/707/707
    Posted date:  Apr 13, 2011 12:58 PM
  Number of letters in database: 1,221,021
  Number of sequences in database:  3697
  
Lambda     K      H
   0.319    0.138    0.442 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 3697
Number of Hits to DB: 976,048
Number of extensions: 43011
Number of successful extensions: 85
Number of sequences better than 1.0e-08: 1
Number of HSP's gapped: 85
Number of HSP's successfully gapped: 1
Length of query: 373
Length of database: 1,221,021
Length adjustment: 85
Effective length of query: 288
Effective length of database: 906,776
Effective search space: 261151488
Effective search space used: 261151488
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 130 (54.7 bits)