BLASTP 2.2.18 [Mar-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0001.3716.p
         (165 letters)

Database: BlastDatabases/707/707 
           3697 sequences; 1,221,021 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|152980104|ref|YP_001352028.1| glutathione peroxidase [Janthin...   251   2e-68
gi|152981381|ref|YP_001354864.1| glutathione peroxidase [Janthin...   136   5e-34

>gi|152980104|ref|YP_001352028.1| glutathione peroxidase
           [Janthinobacterium sp. Marseille]
          Length = 161

 Score =  251 bits (641), Expect = 2e-68,   Method: Compositional matrix adjust.
 Identities = 116/161 (72%), Positives = 137/161 (85%)

Query: 1   MTTLYDFQPRLPDQTPFPLEQLRGKVLLIVNSASKCGFTPQYNGLEAIHRQFQARGLEVL 60
           M+ +YDF+       P  L Q R KVLLIVN+ASKCGFTPQY GLEA+++QF+ +G+EVL
Sbjct: 1   MSKVYDFKADSLAGAPVDLAQYRDKVLLIVNTASKCGFTPQYQGLEAVYQQFRDKGVEVL 60

Query: 61  AFPCNQFGAQEPGNAEEIGAFCEKNYGVSFPLFAKIDVNGEHADPLFQYLKKEAPGLLGS 120
            FPCNQFG QEPG+AE IGAFCEKNYGV+FPLFAKI+VNG+ ADPLF+YLK  APGLLGS
Sbjct: 61  GFPCNQFGGQEPGDAETIGAFCEKNYGVNFPLFAKINVNGDDADPLFKYLKHAAPGLLGS 120

Query: 121 KAIKWNFTKFLVRRDGSVFKRYAPQTRPEEMISDIETLLAE 161
           +AIKWNFTKFLVR+DG+VFKRYAPQT+PEE++ DI  LLAE
Sbjct: 121 EAIKWNFTKFLVRKDGTVFKRYAPQTKPEELVDDINKLLAE 161


>gi|152981381|ref|YP_001354864.1| glutathione peroxidase
           [Janthinobacterium sp. Marseille]
          Length = 254

 Score =  136 bits (343), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 69/155 (44%), Positives = 96/155 (61%), Gaps = 7/155 (4%)

Query: 10  RLPDQTPFPLEQLRGKVLLIVNSASKCGFTPQYNGLEAIHRQFQARGLEVLAFPCNQFGA 69
           RL D+TP  L Q  GKV+L VN+AS CGFT QY GLE ++ +++ RGL +L F  N FG 
Sbjct: 105 RLQDETPQNLCQYAGKVILAVNTASYCGFTVQYEGLEQLYAKYKDRGLVILGFASNDFGQ 164

Query: 70  QEPGNAEEIGAFCEKNYGVSFPLFAKIDVNGEHADPLFQYLKKEAPGLLGSKAIKWNFTK 129
           QEPG  +EI  FC   YGV FP+FAK  V G + +P ++ L        G++  KWNF K
Sbjct: 165 QEPGANKEIAEFCHNTYGVKFPMFAKSSVIGPNINPFYKSLMAN-----GAQTPKWNFHK 219

Query: 130 FLVRRDGSVFKRYAPQTRPE--EMISDIETLLAEE 162
            L+ R G V + Y  +  P+  ++++DIE  LA++
Sbjct: 220 ILLDRSGKVVESYPSKVTPDNKKLVADIEKALAQK 254


  Database: BlastDatabases/707/707
    Posted date:  Apr 13, 2011 12:58 PM
  Number of letters in database: 1,221,021
  Number of sequences in database:  3697
  
Lambda     K      H
   0.320    0.138    0.416 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 3697
Number of Hits to DB: 397,169
Number of extensions: 15662
Number of successful extensions: 38
Number of sequences better than 1.0e-08: 2
Number of HSP's gapped: 37
Number of HSP's successfully gapped: 2
Length of query: 165
Length of database: 1,221,021
Length adjustment: 76
Effective length of query: 89
Effective length of database: 940,049
Effective search space: 83664361
Effective search space used: 83664361
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 126 (53.1 bits)