BLASTP 2.2.18 [Mar-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0001.3691.p
         (593 letters)

Database: BlastDatabases/707/707 
           3697 sequences; 1,221,021 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|152981143|ref|YP_001353513.1| potassium-transporting ATPase s...   783   0.0  

>gi|152981143|ref|YP_001353513.1| potassium-transporting ATPase
           subunit A [Janthinobacterium sp. Marseille]
          Length = 600

 Score =  783 bits (2022), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 384/578 (66%), Positives = 464/578 (80%), Gaps = 10/578 (1%)

Query: 22  PLGWYMARVMEGKSRVNRL--FGGIERIFYRISGIDGEQEMNWKQYAIAVVLFNFIGVVV 79
           PLG Y+A+V  G + +  L      E+  YR++G + + EM+WK YAIA+++FN +G   
Sbjct: 22  PLGTYLAKV-GGTAPIRGLGWLARFEQFLYRMAGSNAQTEMSWKGYAIALLVFNVLGTFF 80

Query: 80  VYLLQRVQLWLPLNPQAFANVSPDSSFNTALSFVTNTDWQGYTGEATMSYLTQMAALAVQ 139
           VY +QR+Q WLPLNPQAF NVSPDSSFNTA+SFV NT+WQGY GE+TMSYLTQM AL+ Q
Sbjct: 81  VYAVQRMQAWLPLNPQAFGNVSPDSSFNTAVSFVANTNWQGYGGESTMSYLTQMLALSGQ 140

Query: 140 NFLSAATGIAIAFALIRGFARHSSKGIGNFWVDMTRSILYVLLPLSVVFALVLVQQGSIQ 199
           NF SAATGIA+ +ALIRGF+  S K IGNFWVD+TRS LYVLLPLSV+ A+VL+ QG IQ
Sbjct: 141 NFFSAATGIAVIYALIRGFSHRSVKSIGNFWVDLTRSTLYVLLPLSVIVAVVLMSQGVIQ 200

Query: 200 NFHAYQDVKTLEVTNYTIPKLDAAGQPLKDAKGEPLTEAQSTDKQTLPMGPVASQEAIKM 259
           NF +Y+DV  ++   Y  PK+   GQP+ D KG P+ E  +   QT+ MGPVASQEAIKM
Sbjct: 201 NFSSYKDVALIDPITYQQPKVGTDGQPVVDDKGAPVLETLTAKTQTIAMGPVASQEAIKM 260

Query: 260 IGTNGGGFFNANSAHPYENPTPLSNFLQMLAILIIPAALCTSFGVLVGDRRQGWAILASM 319
           +GTNGGGFFNANSAHPYENPT  SN ++MLAI +IPAALC +FG +VGD RQGWAIL +M
Sbjct: 261 LGTNGGGFFNANSAHPYENPTAFSNLVEMLAIFLIPAALCFTFGRMVGDMRQGWAILGAM 320

Query: 320 TLLFVVMTLVLMYSESQPNPMLASLHAS-------GPGMMEGKETRFGIPASALFASITT 372
           TLLFVV+T V+M +E Q +P LA+L            G MEGKETRFGI AS LFA++TT
Sbjct: 321 TLLFVVLTAVVMGAEQQAHPGLAALGVDQGASLMQAGGNMEGKETRFGISASTLFAAVTT 380

Query: 373 AASCGAVNAMHDSLSPLGGLVPMLQMQLGEVVFGGVGSGLYGMLIFAVLAVFIAGLMIGR 432
           AASCGAVNAMHDS +PLGG++P + MQLGEVVFGGVG+GLYGML+FA+LAVFIAGLMIGR
Sbjct: 381 AASCGAVNAMHDSFTPLGGMIPTVLMQLGEVVFGGVGTGLYGMLVFAILAVFIAGLMIGR 440

Query: 433 TPEYLGKKIGVFDMKMMSIAILMTPALVLIFTALSVMVEGGLAGIANPGAHGFSEILYAF 492
           TPEYLGKKI  ++MKM S+ IL+TP LVL+ TA++V+++ G AGI NPGAHGFSE+LYAF
Sbjct: 441 TPEYLGKKIQAYEMKMASLVILVTPCLVLLGTAIAVVLDPGKAGILNPGAHGFSEVLYAF 500

Query: 493 SSAANNNGSAFAGLSANTPYYNITTGLCTWLGRFGIIVPVLAMAGSLAAKKRLAATSGTL 552
           +SAANNNGSAFAGLSANTP+YN+   +  W GRF +IVPVLA+AGSLAAKKRL   +GT+
Sbjct: 501 TSAANNNGSAFAGLSANTPFYNVMLAIAMWFGRFAVIVPVLAIAGSLAAKKRLEVNAGTM 560

Query: 553 PTHGPLFVALLIGAVILVGALTYVPALALGPVVEHLQM 590
           PTHGPLF+ALL+G V+LVG L YVPALALGPVVEHLQ+
Sbjct: 561 PTHGPLFIALLVGTVLLVGVLNYVPALALGPVVEHLQL 598


  Database: BlastDatabases/707/707
    Posted date:  Apr 13, 2011 12:58 PM
  Number of letters in database: 1,221,021
  Number of sequences in database:  3697
  
Lambda     K      H
   0.323    0.137    0.404 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 3697
Number of Hits to DB: 1,231,257
Number of extensions: 48029
Number of successful extensions: 172
Number of sequences better than 1.0e-08: 1
Number of HSP's gapped: 171
Number of HSP's successfully gapped: 1
Length of query: 593
Length of database: 1,221,021
Length adjustment: 89
Effective length of query: 504
Effective length of database: 891,988
Effective search space: 449561952
Effective search space used: 449561952
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 132 (55.5 bits)