BLASTP 2.2.18 [Mar-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0001.3607.p
         (218 letters)

Database: BlastDatabases/707/707 
           3697 sequences; 1,221,021 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|152981556|ref|YP_001354369.1| phosphoglycolate phosphatase [J...   288   2e-79
gi|152981574|ref|YP_001351926.1| phosphoglycolate phosphatase [J...    83   1e-17

>gi|152981556|ref|YP_001354369.1| phosphoglycolate phosphatase
           [Janthinobacterium sp. Marseille]
          Length = 219

 Score =  288 bits (737), Expect = 2e-79,   Method: Compositional matrix adjust.
 Identities = 143/217 (65%), Positives = 160/217 (73%)

Query: 1   MPLRPPRAILFDLDGTLADTAPDLAAAANFLRHERGLENAPYENLRPVASAGARGLIGAA 60
           M LR P+AILFDLDGTLADTAPDLA A N LR  RGLE   YE LRP ASAGARGLIGAA
Sbjct: 1   MKLRTPQAILFDLDGTLADTAPDLAGAVNQLRIARGLEPTDYELLRPTASAGARGLIGAA 60

Query: 61  LGIHPGDEEYEALRVRFLDRYQANMTTHSRLFDGIPELLAQLEARGIAWGIVTNKAARFT 120
            G+ P D EY  LR  FL  Y+ ++   SRLFDG+ ELLAQL+A GI WGIVTNK +  T
Sbjct: 61  FGLTPQDAEYPELRDAFLKNYEQSIAVESRLFDGVTELLAQLQAEGIVWGIVTNKVSYLT 120

Query: 121 DVLAPQIGLGHAGCIVSGDTTPHSKPHPAPLLEAARRLQLPAADCWYVGDDLRDIQAGRA 180
           D L PQIGL HA C++SGDT  H KPHPAPL EAA+R+ +    CWYVGDDLRDIQAG+A
Sbjct: 121 DRLVPQIGLDHAACVISGDTASHPKPHPAPLFEAAKRIGIDPEHCWYVGDDLRDIQAGQA 180

Query: 181 ADMPTIAAAWGYCGHTEPAGWQADALLHEPLQILTLL 217
           A M TIAA WGYCG+  PA W ADAL   P Q+ TL+
Sbjct: 181 AGMTTIAAGWGYCGNIAPASWNADALAESPEQLFTLI 217


>gi|152981574|ref|YP_001351926.1| phosphoglycolate phosphatase
           [Janthinobacterium sp. Marseille]
          Length = 223

 Score = 83.2 bits (204), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 60/195 (30%), Positives = 85/195 (43%), Gaps = 5/195 (2%)

Query: 3   LRPPRAILFDLDGTLADTAPDLAAAANFLRHERGLENAPYENLRPVASAGARGLIGAALG 62
           L   R ++ DLDGT+  TA DL  A N +R   GL     +        GA  L+   +G
Sbjct: 2   LHGIRGVIIDLDGTMLHTAQDLHIAINRMRAGLGLAPLDLDTAISFVGKGAENLVRKTIG 61

Query: 63  IHPGDEEYEALRVR----FLDRYQANMTTHSRLFDGIPELLAQLEARGIAWGIVTNKAAR 118
           +   D E E         F   Y       +  + G+ E L +++A+G+    VTNK   
Sbjct: 62  VDFSDSEVEQRFAEAMALFEQHYFDVNGEFATAYPGVHEGLQEMQAKGLRLACVTNKPIA 121

Query: 119 FTDVLAPQIGL-GHAGCIVSGDTTPHSKPHPAPLLEAARRLQLPAADCWYVGDDLRDIQA 177
           FT  L  + GL  +   I  GD+    KP P  LL+     +L  A    +GD + D QA
Sbjct: 122 FTLPLLKKTGLHDYFEIIYGGDSFAKKKPDPMQLLQVCADFELAPAQIVAIGDSINDSQA 181

Query: 178 GRAADMPTIAAAWGY 192
            RAA    +A  +GY
Sbjct: 182 ARAAGCKVLAVPYGY 196


  Database: BlastDatabases/707/707
    Posted date:  Apr 13, 2011 12:58 PM
  Number of letters in database: 1,221,021
  Number of sequences in database:  3697
  
Lambda     K      H
   0.321    0.138    0.433 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 3697
Number of Hits to DB: 480,947
Number of extensions: 18817
Number of successful extensions: 48
Number of sequences better than 1.0e-08: 2
Number of HSP's gapped: 48
Number of HSP's successfully gapped: 2
Length of query: 218
Length of database: 1,221,021
Length adjustment: 80
Effective length of query: 138
Effective length of database: 925,261
Effective search space: 127686018
Effective search space used: 127686018
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 127 (53.5 bits)