BLASTP 2.2.18 [Mar-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0001.3581.p
         (847 letters)

Database: BlastDatabases/707/707 
           3697 sequences; 1,221,021 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|152982817|ref|YP_001355377.1| hypothetical protein mma_3687 [...   669   0.0  

>gi|152982817|ref|YP_001355377.1| hypothetical protein mma_3687
           [Janthinobacterium sp. Marseille]
          Length = 857

 Score =  669 bits (1725), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 366/841 (43%), Positives = 515/841 (61%), Gaps = 22/841 (2%)

Query: 6   QSQHFLRHMPAIVDCERALRELSGAWRLIESTTKMVCPAEAKSILPTIKITREGFNQLEK 65
           Q   FL +M  +  CE++LREL+  WR+IE++ KM CP EAK+ILPT+  TR GFN+LE+
Sbjct: 8   QIDTFLPYMRDVSRCEQSLRELNLMWRMIEASAKMNCPVEAKAILPTMAATRAGFNRLEQ 67

Query: 66  RLIANLVEQNISKVVQEFDFKARVIIDIVVRNLFERTADVGFLAMDDAIRSFILEGPEAD 125
            L+++LV + ++ V++E   KA+ +IDIVVRNL+ERTADVGFLA D  + SF+  G   D
Sbjct: 68  ELVSSLVREKVANVLEEIGTKAQYVIDIVVRNLYERTADVGFLATDRELCSFV-AGLHED 126

Query: 126 SREIVERLQAYRQKYTVYDEIFILDTEGRVLAHLDQDNAVECSYDPLVARTLAAAGYVET 185
              I  RL+AYR KYTVYDEI ++D  G VL  +D+   +E + DPL+  TLA+  YVET
Sbjct: 127 RDMIRARLRAYRNKYTVYDEIMLIDVAGNVLVQIDEATPLEGTTDPLLHATLASDTYVET 186

Query: 186 FAVSDLRGGQ-RALIYSHKIVDPADGQPIGVLCLCFPVAVEMNDIFSGLRKPHDRSVMLM 244
           F  +DLR G+  AL+YS ++  P  G  +G+LCLCF    EM  IF   R P  RS ML+
Sbjct: 187 FRATDLRPGKHEALVYSRRMHHPDTGAVVGILCLCFHFEEEMAGIFRSHRDPAQRSNMLL 246

Query: 245 LDGEGRVIASSDSQHVPVGCIVPLALEDSYQIVSHAGREYLARTCAARNYQGYSGP-GWF 303
           LDG  RVIAS+D   +PVG  VP+  +   ++V + GREYLART +A  YQGY GP GW 
Sbjct: 247 LDGSNRVIASADPLWIPVGATVPVNRDADPRLVVYGGREYLARTFSADGYQGYMGPPGWQ 306

Query: 304 GHVMVACDLAFRQPNQDMLAQYDPQLLAGVMSHAKSFCPPLHDVTTMADAINHSLRRVVW 363
           G VM+  +L F       L   D  +  G++SHA+SFCPPL ++ + A+ I    RRVVW
Sbjct: 307 GQVMIPVELGFTGLATTALKSLDADVADGLLSHAQSFCPPLFEIMSAAETI----RRVVW 362

Query: 364 NGKIMASGEAGDLLRLKAILQEISQTGDETNEVFRKSILDLYATALSANLQDGQYISRLM 423
           NG++M +G+ G+LL+LK IL++IS+TG  +NE+F +SI DLY T LS++L D +++S LM
Sbjct: 363 NGQVMTAGQNGELLKLKTILEQISETGARSNELFSQSIRDLYETVLSSSLSDSEFVSHLM 422

Query: 424 VDIMDRNLYERANDCRWWSLTPRLRQIMAKEVRSAAELAEMTAILSAINALYTVYARLVV 483
           VD++DRNLYER++DCRWW+LTP L+  +A+  +SA  +A +T IL  IN+LYTVY R+ +
Sbjct: 423 VDLLDRNLYERSDDCRWWALTPELQVALAEPHKSAESVARLTEILDYINSLYTVYTRIFI 482

Query: 484 FDAQGRIVATSSPLADGSELIGTYVEPQLLRDTLHLTDASQYCVSPFAPTPLYDGAATYL 543
           +D++G I+A++    DG E++GT ++   L +   L    QY V+PF  T LY    TY+
Sbjct: 483 YDSEGVIIASTDFKEDGLEVVGTSIDGTTLENVAMLRSDQQYYVTPFESTALYGERPTYV 542

Query: 544 YCAALFHPER-AQAMGGIAVVFDATPEFANMLAGALPEHPGAFAAYTDRHGQVISSTHAD 602
           Y AA+ HPE  AQ +GGI +VFDA PEFA ML GAL +     A + +R G++ISST   
Sbjct: 543 YHAAIRHPEHTAQMVGGIGIVFDAEPEFAAMLKGALGDKEDVSALFINRSGRIISSTDPT 602

Query: 603 YPPGSVLPLGSKASAGANGSSTADIRIHEGSYMVVGHTTSFGYREYKNDGQYVNDVIASV 662
            P G VL +  +  A  NGSST+ I IH+G Y ++G T S GYRE+K    Y  DV+A V
Sbjct: 603 RPVGDVLEIAPELLAMENGSSTSRIVIHDGHYAILGCTVSHGYREFKTSDGYREDVLAVV 662

Query: 663 FVPIGQQSDAEPALES--SSVEATPCTGPKREFASIRLDGATFALPAAQVVESIEAERML 720
           +   G++        +  +++E      P REFA+  +DG+ FA+ A    E++      
Sbjct: 663 YKSFGEERQKLNNGNNVDTTLEVDINAVPGREFATFFIDGSLFAIAAEHAEEAL------ 716

Query: 721 STSTFKPVLAGALDYQDG------SGAASVFVPVVDMRQLLLGSSTAQHQGKEIIIVRHA 774
             S   PV  G    + G         A  FV V D+  L+ G  +      ++IIVR  
Sbjct: 717 PASAVSPVSMGGRAERIGILGLHHDNEAKRFVWVFDLGHLMRGYRSEIDSSSQVIIVRRG 776

Query: 775 GRTVGLLVDSLHDVLEFGEIHIDAAFRIPGSEHNYICNLIRTADAGSTIQVIDVERIVTL 834
            +++GLLV  LH V EF E  I        S+   +  +I+       IQ I+V+ +  L
Sbjct: 777 SQSIGLLVSELHGVPEFQESQITPTPLASPSDGMLVTEVIQANGGRLLIQAINVDHLFAL 836

Query: 835 F 835
            
Sbjct: 837 L 837


  Database: BlastDatabases/707/707
    Posted date:  Apr 13, 2011 12:58 PM
  Number of letters in database: 1,221,021
  Number of sequences in database:  3697
  
Lambda     K      H
   0.321    0.135    0.393 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 3697
Number of Hits to DB: 1,895,748
Number of extensions: 77982
Number of successful extensions: 245
Number of sequences better than 1.0e-08: 1
Number of HSP's gapped: 234
Number of HSP's successfully gapped: 1
Length of query: 847
Length of database: 1,221,021
Length adjustment: 91
Effective length of query: 756
Effective length of database: 884,594
Effective search space: 668753064
Effective search space used: 668753064
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 134 (56.2 bits)