BLASTP 2.2.18 [Mar-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0001.3519.p
         (343 letters)

Database: BlastDatabases/707/707 
           3697 sequences; 1,221,021 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|152980899|ref|YP_001354766.1| nitrilase [Janthinobacterium sp...   187   6e-49
gi|152979847|ref|YP_001354170.1| nitrilase [Janthinobacterium sp...   157   1e-39

>gi|152980899|ref|YP_001354766.1| nitrilase [Janthinobacterium sp.
           Marseille]
          Length = 355

 Score =  187 bits (476), Expect = 6e-49,   Method: Compositional matrix adjust.
 Identities = 117/327 (35%), Positives = 181/327 (55%), Gaps = 15/327 (4%)

Query: 1   MQQQP-LKVAVVQAAPAFLDLDAGVDKSITLIAQAAASGARLIAFPETWLPGYPFWIWLG 59
           M++ P  K A   AAP + D  A +DK+  LIA+AA +GA LIAFPE ++  +P  IW G
Sbjct: 1   MKEYPKFKAAACHAAPIYFDTPATIDKACDLIAEAARNGASLIAFPEAFVSAFP--IWCG 58

Query: 60  TPAWSISRGFVNRYFDNSLRYDSPQAERLRQAARQHGVYVVMGLSERAGSSL---YIAQW 116
             A   +  F  +   +++  + P+  +LR+AAR+HGV+V MG++E    S+   +    
Sbjct: 59  VWAPVETHEFFFKLASSAIEINGPEVAQLREAARRHGVFVSMGINEGTPISMGCVWDTNI 118

Query: 117 IIGPDGQDIARRRKLKPTHVERTVFGDGDGSDLAVHDLDIGRLGALCCWEHLQPLSKYAM 176
           +IG DG  + R RKL  TH E+  +  GDGS L V D  IGR+GAL C E+   L+++++
Sbjct: 119 LIGDDGSILNRHRKLIATHWEKLAWASGDGSGLRVVDTRIGRIGALVCGENTNALARFSL 178

Query: 177 YAQNEQVHVAA----WPSFSLYQPMAYALSATVNNAASRMYAVEGSCFVLGPCATVSAAM 232
            AQ E VH++A    WP+    + +AY L A++   A    A EG  F +     +    
Sbjct: 179 MAQGENVHISAYSPRWPTHPSGE-VAYDLEASIRLRAG-AAAFEGKMFNIVASGFLPPEA 236

Query: 233 IELLC--DCHDKHALLQAGGGYSVIYGPDGTSLAQPLGEDQEGLLFAELDFNAITVAKSV 290
           I+++   D   +  + +A    S+I GPDG  ++  L +D+EG+++A++D     V K  
Sbjct: 237 IDMISRNDPRVRRLMEEASKSVSMIMGPDGMPISDTL-QDEEGIVYADIDLAKCVVPKQF 295

Query: 291 ADPAGHYARPDVTRLLLNRNRARPVEY 317
            D  G+Y R DV  L +NR    PVE+
Sbjct: 296 QDVVGYYNRFDVFELKVNRRALTPVEF 322


>gi|152979847|ref|YP_001354170.1| nitrilase [Janthinobacterium sp.
           Marseille]
          Length = 316

 Score =  157 bits (396), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 111/314 (35%), Positives = 155/314 (49%), Gaps = 21/314 (6%)

Query: 6   LKVAVVQAAPAFLDLDAGVDKSITLIAQAAASGARLIAFPETWLPGYPFWIWLGTPAWSI 65
            KVAV QAA    D  A   K++ LI QA  +GA L+ FPE +L GYP     G P    
Sbjct: 4   FKVAVAQAASHPDDAQASTAKAVDLIGQAHRAGAGLLVFPEAFLGGYPKGASFGAPVGMR 63

Query: 66  S---RGFVNRYFDNSLRYDSPQAERLRQAARQHGVYVVMGLSERAGSSLYIAQWIIGPDG 122
               R     YF+N++    P+ E + +A R  G++ V+G  ER   +LY          
Sbjct: 64  KPEGRQAYLDYFNNAIDLKGPEVEAIAEATRNTGMFAVIGCIERELGTLYCTVLFFNGAQ 123

Query: 123 QDIARRRKLKPTHVERTVFGDGDGSDLAVHDLDIGRLGALCCWEHLQPLSKYAMYAQNEQ 182
             + + RKL PT  ER ++G GDGS + V D  +G++GA+ CWE+  P+ +  MY+Q   
Sbjct: 124 GLVGKHRKLMPTAGERLIWGFGDGSTMPVFDTPLGKIGAVICWENYMPMLRMYMYSQGIG 183

Query: 183 VHVAAWPSFSLYQPMAYALSATVNNAASRMYAVEGSCFVLGPCATVSAAMIELLCDC--- 239
           ++ A         P A      V   + +  A+EG CFVL  C  +  +      +C   
Sbjct: 184 IYCA---------PTADDRDTWV--PSMQHIALEGRCFVLTACQYIKRSAYPATHECALG 232

Query: 240 HDKHALLQAGGGYSVIYGPDGTSLAQPLGEDQEGLLFAELDFNAITVAKSVADPAGHYAR 299
            D   +L  GG  S I  P G  LA P  E  E LL+AE+D + I   K   D AGHYAR
Sbjct: 233 DDPETVLMRGG--SAIIDPLGKVLAGPNFEG-EALLYAEIDTDQIVRGKFDFDVAGHYAR 289

Query: 300 PDVTRLLLNRNRAR 313
           PDV +L ++  RA+
Sbjct: 290 PDVFQLAVD-TRAK 302


  Database: BlastDatabases/707/707
    Posted date:  Apr 13, 2011 12:58 PM
  Number of letters in database: 1,221,021
  Number of sequences in database:  3697
  
Lambda     K      H
   0.320    0.135    0.418 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 3697
Number of Hits to DB: 845,625
Number of extensions: 36916
Number of successful extensions: 89
Number of sequences better than 1.0e-08: 2
Number of HSP's gapped: 81
Number of HSP's successfully gapped: 2
Length of query: 343
Length of database: 1,221,021
Length adjustment: 84
Effective length of query: 259
Effective length of database: 910,473
Effective search space: 235812507
Effective search space used: 235812507
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 130 (54.7 bits)