BLASTP 2.2.18 [Mar-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0001.3513.p
         (346 letters)

Database: BlastDatabases/707/707 
           3697 sequences; 1,221,021 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|152980899|ref|YP_001354766.1| nitrilase [Janthinobacterium sp...   363   e-101
gi|152979847|ref|YP_001354170.1| nitrilase [Janthinobacterium sp...   120   9e-29

>gi|152980899|ref|YP_001354766.1| nitrilase [Janthinobacterium sp.
           Marseille]
          Length = 355

 Score =  363 bits (931), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 164/330 (49%), Positives = 233/330 (70%), Gaps = 1/330 (0%)

Query: 4   PIVKVAAMHVSPVYMDSVATLKKAVSLIAEAASNNVDLIVFPESFIPGFPIWAALWAPIY 63
           P  K AA H +P+Y D+ AT+ KA  LIAEAA N   LI FPE+F+  FPIW  +WAP+ 
Sbjct: 5   PKFKAAACHAAPIYFDTPATIDKACDLIAEAARNGASLIAFPEAFVSAFPIWCGVWAPVE 64

Query: 64  NHEWFKKMVANSILVDGPEIAELCAAAKKHKVFVSIGFSESTRISLGCIWNSNVLISEEG 123
            HE+F K+ +++I ++GPE+A+L  AA++H VFVS+G +E T IS+GC+W++N+LI ++G
Sbjct: 65  THEFFFKLASSAIEINGPEVAQLREAARRHGVFVSMGINEGTPISMGCVWDTNILIGDDG 124

Query: 124 KILNHHRKLVPTFYEKMVWAPGDGAGLQVADTRIGKVGGLICGENTNPLARYSLIAQGEQ 183
            ILN HRKL+ T +EK+ WA GDG+GL+V DTRIG++G L+CGENTN LAR+SL+AQGE 
Sbjct: 125 SILNRHRKLIATHWEKLAWASGDGSGLRVVDTRIGRIGALVCGENTNALARFSLMAQGEN 184

Query: 184 IHISSWPPIWPTKKPGSGENFDNVSANRIRAGAHSFEAKAYGILCGSYLDQGTIDMLLAH 243
           +HIS++ P WPT  P     +D  ++ R+RAGA +FE K + I+   +L    IDM+  +
Sbjct: 185 VHISAYSPRWPT-HPSGEVAYDLEASIRLRAGAAAFEGKMFNIVASGFLPPEAIDMISRN 243

Query: 244 DPTIGELLEKTPRSVTQFVTPTGSQTGDSLQADEGIAYATFDLNACIEPKQFHDVVGYYN 303
           DP +  L+E+  +SV+  + P G    D+LQ +EGI YA  DL  C+ PKQF DVVGYYN
Sbjct: 244 DPRVRRLMEEASKSVSMIMGPDGMPISDTLQDEEGIVYADIDLAKCVVPKQFQDVVGYYN 303

Query: 304 RFDIFKVVVDRSRLAPVHWRNADEPADLSK 333
           RFD+F++ V+R  L PV + +A   A+ ++
Sbjct: 304 RFDVFELKVNRRALTPVEFNDAAAEAERAQ 333


>gi|152979847|ref|YP_001354170.1| nitrilase [Janthinobacterium sp.
           Marseille]
          Length = 316

 Score =  120 bits (302), Expect = 9e-29,   Method: Compositional matrix adjust.
 Identities = 87/317 (27%), Positives = 145/317 (45%), Gaps = 25/317 (7%)

Query: 3   LPIVKVAAMHVSPVYMDSVATLKKAVSLIAEAASNNVDLIVFPESFIPGFPIWAALWAPI 62
           + I KVA    +    D+ A+  KAV LI +A      L+VFPE+F+ G+P  A+  AP+
Sbjct: 1   MTIFKVAVAQAASHPDDAQASTAKAVDLIGQAHRAGAGLLVFPEAFLGGYPKGASFGAPV 60

Query: 63  -----YNHEWFKKMVANSILVDGPEIAELCAAAKKHKVFVSIGFSESTRISLGCIWNSNV 117
                   + +     N+I + GPE+  +  A +   +F  IG  E     LG ++ + +
Sbjct: 61  GMRKPEGRQAYLDYFNNAIDLKGPEVEAIAEATRNTGMFAVIGCIER---ELGTLYCTVL 117

Query: 118 LISEEGKILNHHRKLVPTFYEKMVWAPGDGAGLQVADTRIGKVGGLICGENTNPLARYSL 177
             +    ++  HRKL+PT  E+++W  GDG+ + V DT +GK+G +IC EN  P+ R  +
Sbjct: 118 FFNGAQGLVGKHRKLMPTAGERLIWGFGDGSTMPVFDTPLGKIGAVICWENYMPMLRMYM 177

Query: 178 IAQGEQIHISSWPPIWPTKKPGSGENFDNVSANRIRAGAHSFEAKAYGILCGSYLDQGTI 237
            +QG  I+ +       T  P         S   I     + E + + +    Y+ +   
Sbjct: 178 YSQGIGIYCAPTADDRDTWVP---------SMQHI-----ALEGRCFVLTACQYIKRSAY 223

Query: 238 DMLLAHDPTIGELLEKT-PRSVTQFVTPTGSQTGDSLQADEGIAYATFDLNACIEPKQFH 296
                H+  +G+  E    R  +  + P G          E + YA  D +  +  K   
Sbjct: 224 PA--THECALGDDPETVLMRGGSAIIDPLGKVLAGPNFEGEALLYAEIDTDQIVRGKFDF 281

Query: 297 DVVGYYNRFDIFKVVVD 313
           DV G+Y R D+F++ VD
Sbjct: 282 DVAGHYARPDVFQLAVD 298


  Database: BlastDatabases/707/707
    Posted date:  Apr 13, 2011 12:58 PM
  Number of letters in database: 1,221,021
  Number of sequences in database:  3697
  
Lambda     K      H
   0.318    0.134    0.413 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 3697
Number of Hits to DB: 853,404
Number of extensions: 36090
Number of successful extensions: 96
Number of sequences better than 1.0e-08: 2
Number of HSP's gapped: 92
Number of HSP's successfully gapped: 2
Length of query: 346
Length of database: 1,221,021
Length adjustment: 84
Effective length of query: 262
Effective length of database: 910,473
Effective search space: 238543926
Effective search space used: 238543926
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 130 (54.7 bits)