BLASTP 2.2.18 [Mar-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0001.3465.p
         (221 letters)

Database: BlastDatabases/707/707 
           3697 sequences; 1,221,021 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|152980100|ref|YP_001352231.1| nicotinate-nucleotide adenylylt...   322   1e-89

>gi|152980100|ref|YP_001352231.1| nicotinate-nucleotide
           adenylyltransferase [Janthinobacterium sp. Marseille]
          Length = 223

 Score =  322 bits (825), Expect = 1e-89,   Method: Compositional matrix adjust.
 Identities = 154/216 (71%), Positives = 175/216 (81%)

Query: 5   AAPRCIAVLGGSFDPVHNGHVRLAEHFVQLLQPDELRVIPTGNPWQKHGLQAAPADRVEM 64
           AA RC+A+LGGSFDPVHNGHV LA +FV LL+PDELRVIP GNPWQKHGLQA+  DRV M
Sbjct: 7   AATRCVAILGGSFDPVHNGHVALANYFVDLLKPDELRVIPAGNPWQKHGLQASGKDRVAM 66

Query: 65  VRLAFDRQQVPVVIDEQEIRRASATYTIDTLRALRAELGPAVSIVFLMGADQLQHLDTWQ 124
           VR AF  Q+  + ID+QEI R SATYTIDTLRALRAELGP VSI+FLMGADQLQHL+TWQ
Sbjct: 67  VRSAFSAQKTALCIDQQEILRDSATYTIDTLRALRAELGPQVSIIFLMGADQLQHLNTWQ 126

Query: 125 HWQELFDLAHLCAASRPGFELADAHVPPAVREEFKRRNAAPQDIRSTPHGYGYLALGLAV 184
            WQ +FD AH+CAASRPGF +  AH+P AV +EF +R A P+ IR+TP G  YLA  LAV
Sbjct: 127 EWQHMFDYAHICAASRPGFAMDAAHIPAAVAQEFTQRAATPEQIRTTPQGLAYLAPNLAV 186

Query: 185 DISSTEIRAQLQRGTRPDSLIPGRVLDYIEQQHLYR 220
           DIS+T IRA LQRG RP SL+P  VLDYIEQ HLY+
Sbjct: 187 DISATGIRAALQRGERPISLVPPGVLDYIEQHHLYK 222


  Database: BlastDatabases/707/707
    Posted date:  Apr 13, 2011 12:58 PM
  Number of letters in database: 1,221,021
  Number of sequences in database:  3697
  
Lambda     K      H
   0.323    0.138    0.424 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 3697
Number of Hits to DB: 556,723
Number of extensions: 22356
Number of successful extensions: 51
Number of sequences better than 1.0e-08: 1
Number of HSP's gapped: 51
Number of HSP's successfully gapped: 1
Length of query: 221
Length of database: 1,221,021
Length adjustment: 80
Effective length of query: 141
Effective length of database: 925,261
Effective search space: 130461801
Effective search space used: 130461801
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 128 (53.9 bits)