BLASTP 2.2.18 [Mar-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0001.3414.p
         (189 letters)

Database: BlastDatabases/707/707 
           3697 sequences; 1,221,021 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|152980277|ref|YP_001352874.1| deoxycytidine triphosphate deam...   367   e-103

>gi|152980277|ref|YP_001352874.1| deoxycytidine triphosphate
           deaminase [Janthinobacterium sp. Marseille]
          Length = 188

 Score =  367 bits (941), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 175/189 (92%), Positives = 182/189 (96%), Gaps = 1/189 (0%)

Query: 1   MAIKSDKWIRRMAEQEGMIEPYEPGQVRQAADGSKIVSYGTSSYGYDIRCANEFKIFTNI 60
           M IKSDKWIRRMAEQ GMIEP+EPGQVRQ+ +G KIVSYGTSSYGYDIRCA+EFKIFTNI
Sbjct: 1   MTIKSDKWIRRMAEQTGMIEPFEPGQVRQS-NGQKIVSYGTSSYGYDIRCADEFKIFTNI 59

Query: 61  NSTIVDPKNFDEKSFVDFKGDVCIIPPNSFALARTVEYFRIPRSVLTICLGKSTYARCGI 120
           NSTIVDPKNFDE SFVD K DVCIIPPNSFALART+EYFRIPR+VLTICLGKSTYARCGI
Sbjct: 60  NSTIVDPKNFDENSFVDIKSDVCIIPPNSFALARTIEYFRIPRNVLTICLGKSTYARCGI 119

Query: 121 IVNVTPFEPEWEGYVTLEFSNTTPLPAKIYAGEGCAQVLFFESDEICETSYKDRGGKYQG 180
           IVNVTPFEPEWEGYVTLEFSNTTPLPAKIYAGEGCAQVLFFESDE+CETSYKDRGGKYQG
Sbjct: 120 IVNVTPFEPEWEGYVTLEFSNTTPLPAKIYAGEGCAQVLFFESDEVCETSYKDRGGKYQG 179

Query: 181 QHGVTLPKT 189
           QHGVTLPKT
Sbjct: 180 QHGVTLPKT 188


  Database: BlastDatabases/707/707
    Posted date:  Apr 13, 2011 12:58 PM
  Number of letters in database: 1,221,021
  Number of sequences in database:  3697
  
Lambda     K      H
   0.319    0.137    0.420 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 3697
Number of Hits to DB: 448,666
Number of extensions: 16821
Number of successful extensions: 35
Number of sequences better than 1.0e-08: 1
Number of HSP's gapped: 34
Number of HSP's successfully gapped: 1
Length of query: 189
Length of database: 1,221,021
Length adjustment: 78
Effective length of query: 111
Effective length of database: 932,655
Effective search space: 103524705
Effective search space used: 103524705
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 127 (53.5 bits)