BLASTP 2.2.18 [Mar-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0001.3413.p
         (143 letters)

Database: BlastDatabases/707/707 
           3697 sequences; 1,221,021 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|152981705|ref|YP_001354319.1| NADPH-dependent FMN reductase [...   196   6e-52
gi|152981880|ref|YP_001355119.1| arsenate reductase [Janthinobac...    72   1e-14

>gi|152981705|ref|YP_001354319.1| NADPH-dependent FMN reductase
           [Janthinobacterium sp. Marseille]
          Length = 378

 Score =  196 bits (497), Expect = 6e-52,   Method: Compositional matrix adjust.
 Identities = 93/134 (69%), Positives = 111/134 (82%)

Query: 4   IYHNPACGTSRNTLAMIRNSGEEPTIIQYLQHPPSREQLVRMIQDAGLTVRDAIRQKGTP 63
           I+HNP CGTSRNTLA+IR+   EP I++YL+ PP+R++L  MI++AGLTVRDA+R+KGTP
Sbjct: 5   IFHNPDCGTSRNTLALIRHLDIEPEIVEYLRTPPARDELSLMIKNAGLTVRDALRKKGTP 64

Query: 64  YAELGLDDLALSDDQLLDAMLAHPILINRPFVVTSKGTRLCRPSELVLDILEHPQQGAFT 123
           YAELGLDD AL DD LLDAM+AHPILINRPFV+T  GTRLCRPSELVLD+L      AF 
Sbjct: 65  YAELGLDDPALGDDALLDAMIAHPILINRPFVITPVGTRLCRPSELVLDLLPPSPAKAFI 124

Query: 124 KEDGEAVVNAEGQR 137
           KEDGE V++  GQR
Sbjct: 125 KEDGELVIDEHGQR 138


>gi|152981880|ref|YP_001355119.1| arsenate reductase
           [Janthinobacterium sp. Marseille]
          Length = 123

 Score = 72.0 bits (175), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 45/125 (36%), Positives = 66/125 (52%), Gaps = 10/125 (8%)

Query: 1   MTTIYHNPACGTSRNTLAMIR----NSGEEPTIIQYLQHPPSREQLVRMIQ----DAGLT 52
           M TIYHNP C  SR TLA+        G E  ++ Y + P +R+QL  + Q    +  ++
Sbjct: 1   MLTIYHNPRCSKSRETLALTEAFAAQHGLELNVVDYQKTPLNRQQLAELHQVLQSEGAVS 60

Query: 53  VRDAIRQKGTPYAELGLDDLALSDDQLLDAMLAHPILINRPFVVTSKGTRLCRPSELVLD 112
           V   +R     ++ L L +   +D QLLDA+ +HP L+ RP V  ++   + RP ELV  
Sbjct: 61  VTAMVRDNEDEFSALQLSNA--NDAQLLDALASHPKLLQRPIVRFNQRAAIGRPPELVKA 118

Query: 113 ILEHP 117
           IL  P
Sbjct: 119 ILVAP 123


  Database: BlastDatabases/707/707
    Posted date:  Apr 13, 2011 12:58 PM
  Number of letters in database: 1,221,021
  Number of sequences in database:  3697
  
Lambda     K      H
   0.317    0.135    0.389 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 3697
Number of Hits to DB: 266,361
Number of extensions: 7809
Number of successful extensions: 37
Number of sequences better than 1.0e-08: 2
Number of HSP's gapped: 36
Number of HSP's successfully gapped: 2
Length of query: 143
Length of database: 1,221,021
Length adjustment: 75
Effective length of query: 68
Effective length of database: 943,746
Effective search space: 64174728
Effective search space used: 64174728
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 125 (52.8 bits)