BLASTP 2.2.18 [Mar-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0001.3412.p
         (427 letters)

Database: BlastDatabases/707/707 
           3697 sequences; 1,221,021 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|152979968|ref|YP_001354320.1| arsenite transport protein [Jan...   605   e-174

>gi|152979968|ref|YP_001354320.1| arsenite transport protein
           [Janthinobacterium sp. Marseille]
          Length = 427

 Score =  605 bits (1561), Expect = e-174,   Method: Compositional matrix adjust.
 Identities = 322/412 (78%), Positives = 366/412 (88%)

Query: 15  VIWQPKGLGIGWSACAGAAVALAAGVIHLSDIPVVWHIVWNATATFIAIIIISLLLDKAG 74
           VIWQP+GLGIGWSA  GA  AL  GVI L+DIP+VWHIVWNA+ATFIAIIIISLLLDKAG
Sbjct: 15  VIWQPRGLGIGWSAMGGAVAALLLGVIQLTDIPLVWHIVWNASATFIAIIIISLLLDKAG 74

Query: 75  FFEWAALHVARWGGGRGHLLFVLLVLLGAAVSALFANDGAALILTPIVIAMLLALRFSPQ 134
           FF WAALHVARWGGG G  LFVLL+LLGA V+ALFANDGAALILTPIVIAMLLAL+FS +
Sbjct: 75  FFAWAALHVARWGGGSGRKLFVLLILLGAVVAALFANDGAALILTPIVIAMLLALKFSAR 134

Query: 135 ATLAFVMAAGFIADTASLPLVVSNLVNIVSADFFKIGFAQYASIMIPVDMVSIVATLIVL 194
           ATLAFVMAAGFIADTASLPLVVSNLVNIVSAD+FK+GFA+YA++M+PV++VS+  +L+VL
Sbjct: 135 ATLAFVMAAGFIADTASLPLVVSNLVNIVSADYFKLGFAEYAAVMLPVNLVSVGMSLLVL 194

Query: 195 FIYFRRDIPQHYDLTQLQEAAAAIQDRATFVAGWWVLALLLVGFFWLEDMGVPISAVAAA 254
             YF+RDIP  Y L  + E  +AI D ATF AGWWVLALLLVGFFWLED GVPIS VAAA
Sbjct: 195 LYYFKRDIPASYALDDVAEPRSAIHDAATFTAGWWVLALLLVGFFWLEDKGVPISVVAAA 254

Query: 255 GAVILLAVAGKGQVISTREVIKGAPWQVVFFSLGMYLVVYGLRNAGLTDHLTGVLNGLAE 314
           GA+ILL VAG+G +ISTREV++ APWQ+VFFSLGMYL+VYGLRNAGLTD+L  +LN  A 
Sbjct: 255 GALILLVVAGRGHLISTREVVRDAPWQIVFFSLGMYLLVYGLRNAGLTDYLVELLNVFAR 314

Query: 315 HGVWSAALGTGFLTALLSSIMNNMPTVLVGALSIEATTAQGVVKEAMIYANVIGSDLGPK 374
           +GVW AALGTGFLTALLSS+MNNMPTVLV ALSI+A+ A+G+V+EAM+YANVIGSDLGPK
Sbjct: 315 YGVWGAALGTGFLTALLSSVMNNMPTVLVAALSIDASNAEGLVREAMVYANVIGSDLGPK 374

Query: 375 ITPIGSLATLLWLHVLDQKNIHISWGYYFRVGALLTLPVLLITLSALAIRLG 426
            TPIGSLATLLWLHVL  K+I ISWGYYFR+GA+LTLPVLL+TL ALA+RLG
Sbjct: 375 FTPIGSLATLLWLHVLASKDIKISWGYYFRIGAILTLPVLLVTLCALAVRLG 426


  Database: BlastDatabases/707/707
    Posted date:  Apr 13, 2011 12:58 PM
  Number of letters in database: 1,221,021
  Number of sequences in database:  3697
  
Lambda     K      H
   0.328    0.141    0.431 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 3697
Number of Hits to DB: 719,396
Number of extensions: 23405
Number of successful extensions: 133
Number of sequences better than 1.0e-08: 1
Number of HSP's gapped: 133
Number of HSP's successfully gapped: 1
Length of query: 427
Length of database: 1,221,021
Length adjustment: 86
Effective length of query: 341
Effective length of database: 903,079
Effective search space: 307949939
Effective search space used: 307949939
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.8 bits)
S2: 131 (55.1 bits)