BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0001.3405.p (541 letters) Database: BlastDatabases/707/707 3697 sequences; 1,221,021 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gi|152980965|ref|YP_001355204.1| glucan biosynthesis protein G [... 624 e-180 gi|152979793|ref|YP_001353521.1| glucan biosynthesis protein D [... 400 e-113 >gi|152980965|ref|YP_001355204.1| glucan biosynthesis protein G [Janthinobacterium sp. Marseille] Length = 510 Score = 624 bits (1610), Expect = e-180, Method: Compositional matrix adjust. Identities = 292/490 (59%), Positives = 379/490 (77%), Gaps = 7/490 (1%) Query: 52 ALAFDFNTVAARAKALAGKSYKKPADDLPKSLKDLSYEQASQLYFRDDKSYWRAQKLPFE 111 ALAF+FN VA +A+ L+ SYK P ++ K+L+ L+Y+Q + F+ +++YW A+KLPFE Sbjct: 28 ALAFEFNDVAKKAQQLSTTSYKAPQRNISKALESLNYDQYRDIRFKPERAYWHAEKLPFE 87 Query: 112 LSFIHLGGSYTEPIKINEVVGDAVREIHFSPALFDYSANRSVDPRSLRNIGFAGFRIRFP 171 L+F H G + P++INE+VG R+I F P F+Y AN+ + P L+++G++GFR+ + Sbjct: 88 LTFFHQGRQFESPVRINEIVGQRARQIPFDPRAFNYGANK-LSPHDLKHLGYSGFRVHYA 146 Query: 172 LNSPKVKDDVLTFHGASYFRAMGKGQSYGLSARGLAIDTALYSGEEFPRFTEFWLERPSA 231 +N+PK KD+++ F GASY RA+GKGQ YGLSARGLA+DTAL SGEEFP+F EFW+ERPSA Sbjct: 147 INTPKYKDEIMVFLGASYLRAVGKGQIYGLSARGLAVDTALNSGEEFPKFVEFWIERPSA 206 Query: 232 DAKELVIYALLDSPRATGAYRFVLKPGVDTVMDVKAQLYLRSNVTKLGIAPLTSMFLFGE 291 ++K+L IYALLDS R TGAYRFV+KPG TV +VK+QLYLR NVTKLGIAPLTSM+ FGE Sbjct: 207 NSKQLTIYALLDSRRVTGAYRFVVKPGEQTVTEVKSQLYLRENVTKLGIAPLTSMYFFGE 266 Query: 292 NQPGPADDFRPEVHDSDGLSMQSGTGEWLWRPLVNPKRLLVTSFSFDNPLGFGLMQRDRS 351 NQ +D+RPEVHDSDGLS+QSGTGEW+WRPLVNPKRLLVTS+ NP GFGLMQRD Sbjct: 267 NQRSTTEDYRPEVHDSDGLSIQSGTGEWIWRPLVNPKRLLVTSYGLSNPSGFGLMQRDER 326 Query: 352 FSHYEDLDYNYQSRPSAWVEPKGKWGSGRVELVQIPTPDETNDNIVAYWIPNTLPKPGQP 411 S YEDL+ Y++RPSAWVEP GKWGSGRVELVQIPTPDE NDNIVAYW+P+ +PKPG P Sbjct: 327 QSSYEDLESRYETRPSAWVEPIGKWGSGRVELVQIPTPDEFNDNIVAYWVPDVIPKPGTP 386 Query: 412 FNVEYRLSWQKDNEKRPPLAYVTQTLFGHGYRPKQESKAEEVQQLSIDFDGANLKKLPAN 471 ++YRL W K ++RPPL++VTQT GHG+ K ++ L +DF+G KKLP + Sbjct: 387 IKLDYRLYWNKSAQQRPPLSWVTQTRRGHGHL----RKPDDSTALFVDFEGPIFKKLPQD 442 Query: 472 ARVEGVVEADANGKLASVTTRKNDVTGGWRVEVKLRRLEENKPVELRGFLRNANGGTTLS 531 A++E AD+NG++ T +N+ TGGWR ++++R+++ KP+ELRGFL N TTLS Sbjct: 443 AKIEFRASADSNGEILEAHTYRNEATGGWRAALRVKRVDDKKPIELRGFLHTNN--TTLS 500 Query: 532 ETWSYILPPN 541 ETWSYILP + Sbjct: 501 ETWSYILPAD 510 >gi|152979793|ref|YP_001353521.1| glucan biosynthesis protein D [Janthinobacterium sp. Marseille] Length = 527 Score = 400 bits (1028), Expect = e-113, Method: Compositional matrix adjust. Identities = 215/490 (43%), Positives = 294/490 (60%), Gaps = 8/490 (1%) Query: 52 ALAFDFNTVAARAKALAGKSYKKPADDLPKSLKDLSYEQASQLYFRDDKSYWRAQKLPFE 111 A AFD+ + +A+ LA K Y P +P ++K L ++Q + +RDD + W KL F+ Sbjct: 39 AEAFDYAWLKGQARTLASKPYHAPDYPVPAAVKALDWDQYQAIGYRDDHALWAKDKLRFQ 98 Query: 112 LSFIHLGGSYTEPIKINEVVGDAVREIHFSPALFDYSANRSVDPRSLRNIGFAGFRIRFP 171 + F HLG + +KI+EV E+ + PA+F+Y + +++GFAGFR+ F Sbjct: 99 VKFFHLGMYANQSVKIHEVKDGKAVELAYDPAMFNYGKSGLKGAEMPKDLGFAGFRVNFH 158 Query: 172 LNSPKVKDDVLTFHGASYFRAMGKGQSYGLSARGLAIDTALYSGEEFPRFTEFWLERPSA 231 + + D+ F GASYFRA+G YGLSARGLAID + EEFPRF+EFWLERP+ Sbjct: 159 TDLVR---DITAFLGASYFRAVGGEWQYGLSARGLAIDCGMERPEEFPRFSEFWLERPAK 215 Query: 232 DAKELVIYALLDSPRATGAYRFVLKPGVDTVMDVKAQLYLRSNVTKLGIAPLTSMFLFGE 291 + LV+YALLDSP +GAYRF + PG T+MDV LY R + ++GIAPLTSMF GE Sbjct: 216 QSSHLVVYALLDSPSISGAYRFEIAPGATTLMDVDVALYPRKTIERMGIAPLTSMFQMGE 275 Query: 292 NQPGPADDFRPEVHDSDGLSMQSGTGEWLWRPLVNPKRLLVTSFSFDNPLGFGLMQRDRS 351 N ++D+RPE+HDSDGL M +G GEW+WRPL+NP+ L +++ +NP GFGLMQRDR+ Sbjct: 276 NDRRISNDWRPEIHDSDGLEMWTGNGEWIWRPLLNPEHLRFNAYADENPRGFGLMQRDRN 335 Query: 352 FSHYEDLDYNYQSRPSAWVEPKGKWGSGRVELVQIPTPDETNDNIVAYWIPNTLPKPGQP 411 F HY+D Y RPS WVEPK WG G V+LV+IPT DET DNIVA+W P P+PGQ Sbjct: 336 FDHYQDDGVFYDRRPSLWVEPKAGWGKGSVQLVEIPTVDETFDNIVAFWNPEAKPQPGQE 395 Query: 412 FNVEYRLSWQKDNEKRPPLAYVTQTLFGHGYRPKQESKAEEVQQLSIDFDGANLKKLPAN 471 Y+L W P A V T G G ++ + + ++DF G + L + Sbjct: 396 LLYGYKLHWGAKMPYAPKAATVVATRTGVGGVIGKK-RTYFSWRFAVDFAGGDFALLGKD 454 Query: 472 ARVEGVVEADANGKLASVTTRKNDVTGGWRVEVKLRRLEENK-PVELRGFLRNANGGTTL 530 +V V+ A +G + + R G+R L+ +E K P++LR +L A G L Sbjct: 455 VKVVPVISA-THGTVEITSARPLHDIKGYRAIFDLKVGDEVKGPIDLRLYL--AADGQPL 511 Query: 531 SETWSYILPP 540 SETW Y P Sbjct: 512 SETWLYQWTP 521 Database: BlastDatabases/707/707 Posted date: Apr 13, 2011 12:58 PM Number of letters in database: 1,221,021 Number of sequences in database: 3697 Lambda K H 0.317 0.135 0.412 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 3697 Number of Hits to DB: 1,298,243 Number of extensions: 55575 Number of successful extensions: 137 Number of sequences better than 1.0e-08: 2 Number of HSP's gapped: 133 Number of HSP's successfully gapped: 2 Length of query: 541 Length of database: 1,221,021 Length adjustment: 88 Effective length of query: 453 Effective length of database: 895,685 Effective search space: 405745305 Effective search space used: 405745305 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits) S2: 132 (55.5 bits)