BLASTP 2.2.18 [Mar-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0001.3388.p
         (324 letters)

Database: BlastDatabases/707/707 
           3697 sequences; 1,221,021 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|152981062|ref|YP_001352885.1| hypothetical protein mma_1195 [...   358   e-100
gi|152983055|ref|YP_001352643.1| hypothetical protein mma_0953 [...   198   4e-52

>gi|152981062|ref|YP_001352885.1| hypothetical protein mma_1195
           [Janthinobacterium sp. Marseille]
          Length = 316

 Score =  358 bits (920), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 190/299 (63%), Positives = 224/299 (74%), Gaps = 3/299 (1%)

Query: 23  ELAAALMAPQAFIAPKYFYDALGSKLFEAICALPEYYPTRTEAAIFAAHQEAIAAAVGHG 82
           EL A L A QAF +PKY YDALGSKLFEAIC LPEYYPTRTEA IF  H  AIA A+G G
Sbjct: 18  ELLAGLSAAQAFTSPKYLYDALGSKLFEAICELPEYYPTRTEALIFKTHGRAIAQAIGSG 77

Query: 83  CILIDLGAGNCAKAASLFEVLQPRQYVPVDISGDFLQQSVQGLQRRFAQLPMQPLVMDFS 142
             LIDLGAGNCAKAA LF  LQP QYVPVDIS  FL++S+Q LQ++F  + M  + MDFS
Sbjct: 78  TTLIDLGAGNCAKAARLFPGLQPVQYVPVDISVSFLRESLQRLQQQFPSIVMTGVGMDFS 137

Query: 143 TTLDLPDTVQAEQRLFFYPGSSLGNFDARQALAFLRRLRAALPAGSNDGGVLIGLDLVKE 202
           + L LPD+V+  +RLFFYPGSS+GNF   ++LAFL+R+RAA      DGG+LIG+DLVK+
Sbjct: 138 SELALPDSVRDAKRLFFYPGSSIGNFTPDESLAFLQRIRAAC---DEDGGLLIGVDLVKD 194

Query: 203 VAVLEAAYDDALGVTAAFNLNVLHHVNGLLGADFDPRHWRHVAFYNIHQQRIEMYLEARR 262
            AVL+AAYDDALGVTAAFNLN+L H+N LLG DFD R WRH  F+N    RIEM+LEA  
Sbjct: 195 KAVLDAAYDDALGVTAAFNLNLLRHLNHLLGTDFDVRAWRHRGFFNDKASRIEMHLEAVS 254

Query: 263 DLIVRWPGVRRTFHQGERIHTEYSHKFTEQDILSLLEQAGFGACRMWFDERRWFTVCHA 321
           + IVRWP   R F +GERIHTE S+K+T++    LLEQAGF     W D ++WF VCHA
Sbjct: 255 EQIVRWPQGERRFERGERIHTENSYKYTQRSFTDLLEQAGFRKLSFWTDPQQWFMVCHA 313


>gi|152983055|ref|YP_001352643.1| hypothetical protein mma_0953
           [Janthinobacterium sp. Marseille]
          Length = 322

 Score =  198 bits (504), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 107/305 (35%), Positives = 165/305 (54%), Gaps = 6/305 (1%)

Query: 21  HAELAAALMAPQAFIAPKYFYDALGSKLFEAICALPEYYPTRTEAAIFAAHQEAIAAAVG 80
            +++ + L   +  +  ++ YD LGS+LFE I  +PEYYPTRTE  I   +   IA   G
Sbjct: 21  QSDVMSGLSGLKKTLPCRWLYDNLGSELFEEITRVPEYYPTRTETIILQTYIREIADFAG 80

Query: 81  HGCILIDLGAGNCAKAASLFEVLQPRQ---YVPVDISGDFLQQSVQGLQRRFAQLPMQPL 137
              IL++ GAG   K  +L   LQ      Y+PVDI+G+FL+++   +Q +F  L ++P+
Sbjct: 81  RNAILVEYGAGAGIKTETLIAALQSLALDCYIPVDIAGEFLEETASRIQGKFPHLSIKPV 140

Query: 138 VMDFSTTLDLPDTVQAEQRLFFYPGSSLGNFDARQALAFLRRLRAALPAGSNDGGVLIGL 197
           V DF T   LP  +   +R+ F+PGS++GN   +QA  FLRR+R  +     +G  +IG 
Sbjct: 141 VSDFMTDFALPPNLLGTRRVAFFPGSTIGNLSPKQAGDFLRRMRNHVGP---EGAAIIGF 197

Query: 198 DLVKEVAVLEAAYDDALGVTAAFNLNVLHHVNGLLGADFDPRHWRHVAFYNIHQQRIEMY 257
           DL K+V  + +AYDD  G+T+ FNLN+L  +N  L  +F+   ++H A +N  +  IEM+
Sbjct: 198 DLKKDVETMISAYDDKAGITSKFNLNLLTRINRELEGNFELSRFKHSARWNEEESAIEMH 257

Query: 258 LEARRDLIVRWPGVRRTFHQGERIHTEYSHKFTEQDILSLLEQAGFGACRMWFDERRWFT 317
           + +  + I         F  GE IHTE S K+  +    L    G+    +W D    F 
Sbjct: 258 IVSLEEQIATVGMFNFHFRAGETIHTESSRKYDVKGFEMLANANGWKMDHIWRDSDNKFG 317

Query: 318 VCHAR 322
           +   R
Sbjct: 318 IAGLR 322


  Database: BlastDatabases/707/707
    Posted date:  Apr 13, 2011 12:58 PM
  Number of letters in database: 1,221,021
  Number of sequences in database:  3697
  
Lambda     K      H
   0.325    0.138    0.427 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 3697
Number of Hits to DB: 634,190
Number of extensions: 20775
Number of successful extensions: 84
Number of sequences better than 1.0e-08: 2
Number of HSP's gapped: 80
Number of HSP's successfully gapped: 2
Length of query: 324
Length of database: 1,221,021
Length adjustment: 83
Effective length of query: 241
Effective length of database: 914,170
Effective search space: 220314970
Effective search space used: 220314970
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 129 (54.3 bits)