BLASTP 2.2.18 [Mar-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0001.3370.p
         (263 letters)

Database: BlastDatabases/707/707 
           3697 sequences; 1,221,021 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|152981854|ref|YP_001352899.1| hydroxyacylglutathione hydrolas...   311   2e-86
gi|152983004|ref|YP_001354751.1| hypothetical protein mma_3061 [...    66   3e-12

>gi|152981854|ref|YP_001352899.1| hydroxyacylglutathione hydrolase
           [Janthinobacterium sp. Marseille]
          Length = 258

 Score =  311 bits (797), Expect = 2e-86,   Method: Compositional matrix adjust.
 Identities = 155/262 (59%), Positives = 188/262 (71%), Gaps = 10/262 (3%)

Query: 1   MAVPAFDDNYLWIIHDGHHAAVVDPGDAVPVLAALQAEGLTLAAILLTHHHADHVGGVVD 60
           + VPAF+DNYLWIIHDG HAAVVDPGDA P+LAAL+A  L+L AILLTHHH+DHVGGV  
Sbjct: 7   LTVPAFNDNYLWIIHDGVHAAVVDPGDAKPILAALEAHKLSLVAILLTHHHSDHVGGVST 66

Query: 61  LARQAVSDAFPVVPVYGPAREQSRIKGITIPLHGNEDIDIPALGLRLQVIEVPGHTLGHL 120
           L +         VPV+ P ++   I  +T PL   + + IP LGL L V+ VPGHTLGH+
Sbjct: 67  LLQHFK------VPVFAPRKDP--IANVTQPLDEGDVVTIPELGLELSVLHVPGHTLGHI 118

Query: 121 AYYSDSTEPGLLFCGDTLFAGGCGRLFEGTPAQMVDSLTRLASLPDDTQVYCAHEYTLSN 180
           AY +   E G LFCGDTLFAGGCGRLFEGTP QM+ SL +LA+LPDDT+VYCAHEYT+SN
Sbjct: 119 AYVAK--EQGWLFCGDTLFAGGCGRLFEGTPTQMLASLDKLAALPDDTKVYCAHEYTISN 176

Query: 181 LKFAAEVEPGNAELAARILRERARREKGEATVPTTIALERQTNPFLRAGETQIQQSLQKA 240
           L+FA   EP N  LA+R   E+A+R++   TVP+ I LE+ TNPFLRA E  I + +   
Sbjct: 177 LRFALAAEPANTALASRFEAEQAKRKQNIPTVPSNIGLEKSTNPFLRAREPAIAKQMVAE 236

Query: 241 GRLTQLDEVSSFAALREWKNTY 262
           GR    D V+ FAALREWKN +
Sbjct: 237 GRAKNADPVTVFAALREWKNNF 258


>gi|152983004|ref|YP_001354751.1| hypothetical protein mma_3061
           [Janthinobacterium sp. Marseille]
          Length = 249

 Score = 65.9 bits (159), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 55/185 (29%), Positives = 79/185 (42%), Gaps = 17/185 (9%)

Query: 32  LAALQAEGLTLAAILLTHHHADHVGGVVDLARQAVSDAFPVVPVYGPAREQSRIKGITIP 91
           LA +   GL LA  + TH HADH+ G ++L R   S       +  PA +      I I 
Sbjct: 40  LAEVHRLGLKLAYTVDTHIHADHITGALELKRAVGSK------IATPAHDNLSCTDIGIE 93

Query: 92  LHGNEDIDIPALGLRLQVIEVPGHTLGHLAYYSDSTEPGLLFCGDTLFAGGCGR--LFEG 149
                 +D    G+ L  +  PGHT GH +Y  +      +F GD L   GCGR     G
Sbjct: 94  EGKPFQVD----GITLHPLHTPGHTEGHFSYLFNDR----VFTGDALLIEGCGRTDFQNG 145

Query: 150 TPAQMVDSLT-RLASLPDDTQVYCAHEYTLSNLKFAAEVEPGNAELAARILRERARREKG 208
               +  S+  +L SLPD+T VY +H+Y    +   A+ +  N  L      E  +    
Sbjct: 146 DADALYKSVKEKLFSLPDETLVYPSHDYKQRFVSSIAQEKARNPRLGDNKTLEEFKHIMA 205

Query: 209 EATVP 213
              +P
Sbjct: 206 NLNLP 210


  Database: BlastDatabases/707/707
    Posted date:  Apr 13, 2011 12:58 PM
  Number of letters in database: 1,221,021
  Number of sequences in database:  3697
  
Lambda     K      H
   0.319    0.136    0.404 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 3697
Number of Hits to DB: 522,517
Number of extensions: 18682
Number of successful extensions: 71
Number of sequences better than 1.0e-08: 3
Number of HSP's gapped: 68
Number of HSP's successfully gapped: 3
Length of query: 263
Length of database: 1,221,021
Length adjustment: 81
Effective length of query: 182
Effective length of database: 921,564
Effective search space: 167724648
Effective search space used: 167724648
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 128 (53.9 bits)