BLASTP 2.2.18 [Mar-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0001.3340.p
         (218 letters)

Database: BlastDatabases/707/707 
           3697 sequences; 1,221,021 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|152980521|ref|YP_001353781.1| chemotaxis-specific methylester...    76   2e-15
gi|152980555|ref|YP_001351703.1| chemotaxis-specific methylester...    75   3e-15

>gi|152980521|ref|YP_001353781.1| chemotaxis-specific methylesterase
           [Janthinobacterium sp. Marseille]
          Length = 359

 Score = 75.9 bits (185), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 53/169 (31%), Positives = 76/169 (44%), Gaps = 1/169 (0%)

Query: 20  SIEAIVIGASAGGVEALSEILPALRRGAAVATMVVLHIPRERPSLLASIFADRCAQPVVE 79
           S + I+IGAS GG EA+ + L  +        ++  H+P       A      C   V E
Sbjct: 163 SEKLIIIGASTGGTEAIKDFLMQMPSDCP-GILITQHMPPGFTKSFAQRLDSLCKISVKE 221

Query: 80  AQDKEPAQAGVIYFAPPDYHLLVDRGEEGPLLAMSNDELVNFSRPAIDVLFESAADVYGP 139
           ++  E    G  Y AP   HL + R     +  +     VN  RP++DVLF SAA   G 
Sbjct: 222 SEGGERVLPGHAYLAPGHSHLQLVRSGANYMTQLDQGPPVNRHRPSVDVLFHSAAVHAGK 281

Query: 140 QLLGIVLTGGNHDGAAGLQAIARAGGVTVVQSPQQAQVPYMPAQALALG 188
             +G++LTG   DGA G+  +   G     Q      V  MP +A+A+G
Sbjct: 282 NAVGVILTGMGKDGALGMLEMKNVGAYNFAQDEASCVVFGMPREAIAVG 330


>gi|152980555|ref|YP_001351703.1| chemotaxis-specific methylesterase
           [Janthinobacterium sp. Marseille]
          Length = 336

 Score = 75.5 bits (184), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 59/187 (31%), Positives = 91/187 (48%), Gaps = 3/187 (1%)

Query: 20  SIEAIVIGASAGGVEALSEILPALRRGAAVATMVVLHIPRERPSLLASIFADRCAQPVVE 79
           S   +VIGASAGG  AL+E+L  L      A ++V HI       +A     + A  V  
Sbjct: 151 STRLVVIGASAGGPAALAELLRGLPADFPAAVVIVQHINPAFVDGMADWLQQQTALRVRV 210

Query: 80  AQDKEPAQAGVIYFAPPDYHLLVDRGEEGPLLAMSNDELVNFSRPAIDVLFESAADVYGP 139
           A++ +   +G ++ A  + HLL+   +    L    +   +   P+IDVLF S    +  
Sbjct: 211 AKEGDQPLSGTVFIAGTNQHLLIKNRDS---LGYVQEAPTDIYHPSIDVLFHSVVQQWQG 267

Query: 140 QLLGIVLTGGNHDGAAGLQAIARAGGVTVVQSPQQAQVPYMPAQALALGNIDYVLTLPQI 199
           + +G++LTG   DGA GL+A+      T+VQ  + + V  MP  A+AL     +L +  I
Sbjct: 268 KAVGVLLTGMGRDGALGLKAMHDNKYHTIVQDQESSSVYGMPKAAVALNAATDILPVSGI 327

Query: 200 ADLLRTL 206
           A  L  L
Sbjct: 328 AQKLVNL 334


  Database: BlastDatabases/707/707
    Posted date:  Apr 13, 2011 12:58 PM
  Number of letters in database: 1,221,021
  Number of sequences in database:  3697
  
Lambda     K      H
   0.317    0.136    0.384 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 3697
Number of Hits to DB: 537,094
Number of extensions: 22635
Number of successful extensions: 83
Number of sequences better than 1.0e-08: 2
Number of HSP's gapped: 81
Number of HSP's successfully gapped: 2
Length of query: 218
Length of database: 1,221,021
Length adjustment: 80
Effective length of query: 138
Effective length of database: 925,261
Effective search space: 127686018
Effective search space used: 127686018
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 127 (53.5 bits)