BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0001.3337.p (920 letters) Database: BlastDatabases/707/707 3697 sequences; 1,221,021 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gi|152980975|ref|YP_001355215.1| cation-translocating P-type ATP... 110 5e-25 gi|152982931|ref|YP_001353404.1| cation-translocating P-type ATP... 108 2e-24 gi|152981280|ref|YP_001353512.1| K+-transporting ATPase B chain ... 79 1e-15 gi|152981047|ref|YP_001353486.1| cation-translocating P-type ATP... 63 9e-11 >gi|152980975|ref|YP_001355215.1| cation-translocating P-type ATPase [Janthinobacterium sp. Marseille] Length = 812 Score = 110 bits (274), Expect = 5e-25, Method: Compositional matrix adjust. Identities = 135/544 (24%), Positives = 229/544 (42%), Gaps = 99/544 (18%) Query: 186 LHPKGAR------RVEVPIRKLVPGDVVLLSAGDMIPADLRLLAAKDLFVSQAAMTGESL 239 L P+ AR +V I + GD+V++ G+ I D ++ V ++ +TGESL Sbjct: 296 LRPESARIRRDGVDSDVAIDSVKVGDIVVVRPGERIAVDGTIIEGNS-QVDESLITGESL 354 Query: 240 PVEKFVTASNLNTSSPLELDNLCFMGTNVVSGSATGVVLTTGKRTYFGALAERVTATDRT 299 PV K + A T + + D L + T+ + G T + V Sbjct: 355 PVVKQLGAKV--TGASINADGLLLVRTDAI-----------GAETTLSRIIRMVENAQSA 401 Query: 300 PTAFQAGVNKVSWLLIRFMLVMTPVVFFINGFTKGDWVE-AFLFGLSVAVGLTPEMLPMI 358 Q V+KVS + + +L++ + I + G +E A + +SV V P L + Sbjct: 402 KAPIQRLVDKVSAIFVPIVLLIA-LATLIGWWLAGAGMETAIINAVSVLVIACPCALGLA 460 Query: 359 VTSTLAKGAVALSRKKVIVKRLDAIQNFGAMDVLCTDKTGTLTQDKIFLERHTDIHGE-- 416 + + G ++ +++K +A++ ++ + DKTGTLT K + D+ G Sbjct: 461 TPTAIMAGTGVAAKAGILIKDAEALETVHRVNTVVFDKTGTLTLGK---PQVADMQGNGI 517 Query: 417 PDDEVLQYAYLNSYYQTGLKNLLDVAVLEHAELQREMSIASAYRKVDEIPFDFQRRRMSV 476 P +LQ A + Q G ++ L AV+E A Sbjct: 518 PKKTLLQLA---ATIQNGSEHPLAHAVIESA----------------------------- 545 Query: 477 VVSEREDHHELICKGAVEEIVSVCSRARVNGQVVPLTPALLEEIRATTGGLNAEGLRVVG 536 R+++ +L+ V+ + A +NG+ + L + + E GG AE Sbjct: 546 ----RKENIDLLPVSEVQALPGRGVAAVINGRRLQLGSSRMIEELGLNGGALAE------ 595 Query: 537 VAAKELPPTKEVYS---LADESDLVLIGYIAFLDPPKESTAPALAALRAHGVKVKILTGD 593 A+EL T S LADE L+G IAF D K+S A+++L G+ +L+GD Sbjct: 596 -RAQELENTGHTISWLALADEPK-ELLGLIAFADQIKDSAPRAISSLNGLGIDTVLLSGD 653 Query: 594 NELVTAKICREVGLEVKGMLLGSYVEKMSDAELSQAVETVTVFAKLSPAHKERIVRVLHD 653 N + +G++ V A++ PA K + L Sbjct: 654 NYGSANAVGSALGIK-------------------------HVIAQVLPADKTAKITELQQ 688 Query: 654 RGHVVGFMGDGINDAPALRAADIGISVDTAVDIAKEAADLILLEKSLMVLEAGVLEGRKT 713 H+V +GDGINDAPAL AA +GI++ T D+A AA + L+ ++ + R+T Sbjct: 689 GDHIVAMVGDGINDAPALAAAHVGIAMATGTDVAMHAAGITLMRGDPALVADAIDISRRT 748 Query: 714 FANM 717 ++ + Sbjct: 749 YSKI 752 >gi|152982931|ref|YP_001353404.1| cation-translocating P-type ATPase [Janthinobacterium sp. Marseille] Length = 789 Score = 108 bits (269), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 151/621 (24%), Positives = 250/621 (40%), Gaps = 121/621 (19%) Query: 170 QVEEIAAEAQRYFDVT----LHPKGARRV-------EVPIRKLVPGDVVLLSAGDMIPAD 218 Q+ E+ A +Q + L PK ARR+ +VP+ + D + + G+ +P D Sbjct: 255 QILELKARSQTSAAIKSLLGLAPKTARRINKDGSEEDVPLAHVHVDDSLRVRPGEKVPVD 314 Query: 219 LRLLAAKDLFVSQAAMTGESLPVEKF----VTASNLNTSSPLELDNLCFMGTNVVSGSAT 274 ++ + + ++ +TGE +PV K V + LNTS L + + Sbjct: 315 -GVVVEGESAIDESMLTGEPMPVTKRPGDKVIGATLNTSGSLVIRSE------------- 360 Query: 275 GVVLTTGKRTYFGALAERVTATDRTPTAFQAGVNKVSWLLIRFMLVMTPVVF--FINGFT 332 G +T + + V R+ Q + V+ F+LV+ V F FI Sbjct: 361 ----KIGSQTMLAQIVQMVAQAQRSRAPMQRLADVVAGY---FVLVVVGVAFLTFIGWGM 413 Query: 333 KG---DWVEAFLFGLSVAVGLTPEMLPMIVTSTLAKGAVALSRKKVIVKRLDAIQNFGAM 389 G WV F+ ++V + P L + ++ + + ++ + AI+ + Sbjct: 414 FGPDPSWVFGFVNAVAVLIIACPCALGLATPMSIMAATGRAATQGMLFRDAAAIEGMRKV 473 Query: 390 DVLCTDKTGTLTQDKIFLERHTDIHGEPDDEVLQYAYLNSYYQTGLKNLLDVAVLEHAEL 449 + L DKTGTLT+ K +R G+ + VLQ A + G ++ L A++ A Sbjct: 474 NTLIVDKTGTLTEGKPAFDRVIAAQGQEEQFVLQIA---ASIDQGSEHPLAHAIVAEAR- 529 Query: 450 QREMSIASAYRKVDEIPFDFQRRRMSVVVSEREDHHELICKGAVEEIVSVCSRARVNGQV 509 QR +S+ + P F E + R V+G+ Sbjct: 530 QRGLSL--------DKPESF------------------------ESSSGIGVRGIVSGRR 557 Query: 510 VPL-TPALLEEIRATTGGLN--AEGLRVVGVAAKELPPTKEVYSLADESDLVLIGYIAFL 566 + L AL++E + GL+ AE LR G + +Y D L G IA Sbjct: 558 IALGNTALMDEEKIDWHGLSQQAEALRKEGASV--------IYVAVDGK---LAGLIAVS 606 Query: 567 DPPKESTAPALAALRAHGVKVKILTGDNELVTAKICREVGLEVKGMLLGSYVEKMSDAEL 626 DP K++TA AL LR G+ V + TGD + R++ + Sbjct: 607 DPIKKTTAEALTILREAGMTVIMATGDGATTAKSVARKLDIS------------------ 648 Query: 627 SQAVETVTVFAKLSPAHKERIVRVLHDRGHVVGFMGDGINDAPALRAADIGISVDTAVDI 686 + ++ P K +V L G VV GDGINDAPAL AD+GI++ T D+ Sbjct: 649 -------EFYGEVKPQDKLALVERLQKEGRVVAMAGDGINDAPALAKADVGIAMGTGTDV 701 Query: 687 AKEAADLILLEKSLMVLEAGVLEGRKTFANMLKYIKMTASSNFGNVFSVLIASAFL-PFL 745 A +A L L++ L + T NM + + + N + +A+ L PF Sbjct: 702 AINSAHLTLIKGDLRAIARARQLSLDTVRNMHQNLGF---AFIYNSLGIPLAAGLLYPFT 758 Query: 746 PMLPLHLLVQNLLYDVSQISI 766 L L ++ L +S +S+ Sbjct: 759 GQL-LSPMIAALAMSLSSVSV 778 >gi|152981280|ref|YP_001353512.1| K+-transporting ATPase B chain [Janthinobacterium sp. Marseille] Length = 702 Score = 79.3 bits (194), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 136/580 (23%), Positives = 229/580 (39%), Gaps = 101/580 (17%) Query: 204 GDVVLLSAGDMIPADLRLLAAKDLFVSQAAMTGESLPVEKFVTASNLNTSSPLELDNLCF 263 GD VL+ AGD+IP D ++ V ++A+TGES PV + S + S+ Sbjct: 139 GDTVLVEAGDVIPVDGEVIEGV-ASVDESAITGESAPV---IRESGGDFSA-------VT 187 Query: 264 MGTNVVSGSATGVVLTTGKRTYFGALAERVTATDR--TPTAFQAGVNKVSWLLIRFMLVM 321 GT V+S + + + V R TP + V+ ++ ++ + Sbjct: 188 GGTRVLSDWLVVRIAVNPGEAFIDRMIAMVEGAKRQKTPNEIALTILLVALSIVFLVVTV 247 Query: 322 T--PVVFFINGFTKGDWVEAFLFGLSVAVGLTPEMLPMIVTSTL-AKGAVALSR---KKV 375 T P+ F K V + ++V + L ++P + L A G +SR V Sbjct: 248 TLLPMSLFSVEMAKAAGVASSPITMTVLIALLVCLIPTTIGGLLSAIGVAGMSRMMQANV 307 Query: 376 IVKRLDAIQNFGAMDVLCTDKTGTLTQDKIFLERHTDIHGEPDDEVLQYAYLNSYYQTGL 435 I A++ G +DVL DKTGT+T + ++ + P +Q A + L Sbjct: 308 IATSGRAVEAAGDVDVLLLDKTGTITLGN---RQASEFYPAPGVTQIQLADVAQ-----L 359 Query: 436 KNLLD-------VAVLEHAELQ-REMSIASAYRKVDEIPFDFQRRRMSVVVSEREDHHEL 487 +L D + +L + RE IA+ + + F Q R V + ER Sbjct: 360 ASLADETPEGRSIVILAKQKFNMRERDIAAL--QASFVHFSAQTRMSGVDLGERA----- 412 Query: 488 ICKGAVEEIVSVCSRARVNGQVVPLTPALLEEIRATTGGLNAEGLRVVGVAAKELPPTKE 547 I KG+V+ V V L + EE+ ++ G Sbjct: 413 IRKGSVDA---------VKKHVEALGRSFPEEVSRLVDDISRRG---------------- 447 Query: 548 VYSLADESDLVLIGYIAFLDPPKESTAPALAALRAHGVKVKILTGDNELVTAKICREVGL 607 L D ++G + D K A LR G+K ++TGDN+L A I E G+ Sbjct: 448 STPLVVVDDGRVMGAVELKDIVKGGIKERFAELRRMGIKTVMITGDNKLTAAAIAAEAGV 507 Query: 608 EVKGMLLGSYVEKMSDAELSQAVETVTVFAKLSPAHKERIVRVLHDRGHVVGFMGDGIND 667 + A+ +P K +++R +G +V GDG ND Sbjct: 508 D-------------------------DFLAEATPEDKLKLIRDYQSQGRLVAMTGDGTND 542 Query: 668 APALRAADIGISVDTAVDIAKEAADLILLEKSLMVLEAGVLEGRKTFANMLKYIKMTASS 727 APAL AD+ +++++ AKEA +++ L+ + L V G++ + ++ Sbjct: 543 APALAQADVAVAMNSGTQAAKEAGNMVDLDSNPTKLLEIVEIGKQMLMTRGSLTTFSIAN 602 Query: 728 NFGNVFSVLIASAFLPFLPMLPLHLLVQNLLYDVSQISIP 767 + F++ I +AF+ P L D+ Q+S P Sbjct: 603 DVAKYFAI-IPAAFVTTYPQLK--------ALDIMQLSSP 633 >gi|152981047|ref|YP_001353486.1| cation-translocating P-type ATPase [Janthinobacterium sp. Marseille] Length = 742 Score = 62.8 bits (151), Expect = 9e-11, Method: Compositional matrix adjust. Identities = 142/644 (22%), Positives = 245/644 (38%), Gaps = 133/644 (20%) Query: 96 YVHLWHCYKNPFNLLLTLLAAVSFYTDDMKAATVIGTMVVVSTLLRFVQEARSNTAADKL 155 ++ L H N N L++L + A V+ + + ++ + R+ A L Sbjct: 172 WIALRHFSLN-MNFLMSLAVIGAVLIGQWPEAAVVIFLFAAAEMIEALSLDRARNAIKGL 230 Query: 156 KAMVSNTATVMRHDQVEEIAAEAQRYFDVTLHPKGARRVEVPIRKLVPGDVVLLSAGDMI 215 AM ATV R+D E + A V+V + LV + G+ + Sbjct: 231 MAMAPEMATV-RNDSNEWLPVSA---------------VQVQLDALVR-----VKPGERV 269 Query: 216 PADLRLLAAKDLFVSQAAMTGESLPVEKFVTASNLNTSSPLELDNLCFMGTNVVSGSATG 275 P D ++ + ++QA +TGES+PV K + + F GT G+ Sbjct: 270 PLDGIIVDGQST-INQAPITGESMPVAK-------------QSGDTVFAGTINERGTFDY 315 Query: 276 VVLTTGKRTYFGALAERVTAT--DRTPTAFQAGVNKVSWLLIRFMLVMTPVVFFINGFTK 333 V + + + V +R PT Q V++ + I ++++ +V + Sbjct: 316 RVTALQSNSTLARIIKSVQQVQGERAPT--QRFVDQFARYYIPIVVLLAILVAVLPPLLL 373 Query: 334 GDWVEAFLF-GLSVAVGLTPEMLPMIVTSTLAKGAVALSRKKVIVKRLDAIQNFGAMDVL 392 + +L+ L + V P L + T+ G A +R +++K ++ + L Sbjct: 374 AQPFQPWLYKALVLLVIACPCALVISTPVTVVSGLAAAARHGILIKGGVYLELGRKLKAL 433 Query: 393 CTDKTGTLTQDKIFLERHTDIHGEPDDEVLQYAYLNSYYQTGLKNLLDVAVLEHAELQRE 452 DKTGT+T K + IH E D L +L +A Sbjct: 434 ALDKTGTITVGKPVVTDTQQIH-EGD----------------LHGMLRLAA--------S 468 Query: 453 MSIASAYRKVDEIPFDFQRRRMSVVVSEREDHHELICKGAVEEIVSVCSRARVNGQVVPL 512 +S S + + +Q ++ + + E D L +G Sbjct: 469 LSQRSDHPVSSAVVAHWQAQQSTEALHEVSDFEALTGRG--------------------- 507 Query: 513 TPALLEEIRATTGGL-----NAEGLRVVGVAAKELPPTKEVYSLADESDLVL------IG 561 +R T GG N + +G+ EL + + ++ +VL + Sbjct: 508 -------VRGTIGGEPYYLGNHRLIHELGICGPELEAALDAFEQTGKTAVVLGSGSSPLL 560 Query: 562 YIAFLDPPKESTAPALAALRAHGVKVKILTGDNELVTAKICREVGL-EVKGMLLGSYVEK 620 +A D ++ + A+A L+ GV+V +LTGDN I +VG+ +V+G L Sbjct: 561 ILAAADTIRDGSQAAVAKLQQMGVQVVMLTGDNPHTAEAIGGKVGISDVRGNQL------ 614 Query: 621 MSDAELSQAVETVTVFAKLSPAHKERIVRVLHDRGHVVGFMGDGINDAPALRAADIGISV 680 P K + L R VG +GDGINDAPAL ADIG ++ Sbjct: 615 --------------------PDDKLAAINELRARYGYVGMVGDGINDAPALAQADIGFAM 654 Query: 681 DTA-VDIAKEAADLILLEKSLMVLEAGVLEGRKTFANMLKYIKM 723 A D A E AD+ L++ L L + +KT +++ I + Sbjct: 655 GAAGTDTALETADVALMDDRLGKLADFIGLSKKTHTVLMQNITL 698 Database: BlastDatabases/707/707 Posted date: Apr 13, 2011 12:58 PM Number of letters in database: 1,221,021 Number of sequences in database: 3697 Lambda K H 0.322 0.136 0.396 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 3697 Number of Hits to DB: 1,974,114 Number of extensions: 79645 Number of successful extensions: 286 Number of sequences better than 1.0e-08: 4 Number of HSP's gapped: 278 Number of HSP's successfully gapped: 6 Length of query: 920 Length of database: 1,221,021 Length adjustment: 92 Effective length of query: 828 Effective length of database: 880,897 Effective search space: 729382716 Effective search space used: 729382716 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.9 bits) S2: 134 (56.2 bits)