BLASTP 2.2.18 [Mar-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0001.3328.p
         (182 letters)

Database: BlastDatabases/707/707 
           3697 sequences; 1,221,021 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|152980547|ref|YP_001352298.1| phosphatidylglycerophosphatase ...   230   4e-62

>gi|152980547|ref|YP_001352298.1| phosphatidylglycerophosphatase A
           [Janthinobacterium sp. Marseille]
          Length = 173

 Score =  230 bits (586), Expect = 4e-62,   Method: Compositional matrix adjust.
 Identities = 111/169 (65%), Positives = 130/169 (76%)

Query: 12  PSASPRKRKPTPHFMLAHPAHWIAQGFGSGLSPIMPGTAGTLFAWLSYAVLCTRWPQVFT 71
            S +P   K    FMLAHPAH IAQGFGSGLS IMPGT GTLF WLS+ VL  RWP  FT
Sbjct: 5   ESGAPTTVKSNSSFMLAHPAHIIAQGFGSGLSKIMPGTFGTLFGWLSFNVLTARWPAFFT 64

Query: 72  AANWLVIIAAGFIIGIWACHRTGLALNSPDDGSMVWDEIIAFWLVLVLVTPANLKTQLAA 131
            +NW ++I  GF++G+WAC +TG  L   D GSMVWDE++AFWLVL+ +TPA L  Q  A
Sbjct: 65  PSNWWLVIIGGFLLGVWACAKTGRDLGVSDHGSMVWDEVVAFWLVLLFITPAGLWMQFYA 124

Query: 132 FLVFRFFDMVKPPPIAWFDRHFKGGFGVMWDDIVAAFYTLLVFAFWHTY 180
           FL FRFFDMVKPPPIA+FD+ FKGGFGVM+DDIVAAF+TLLVFA W ++
Sbjct: 125 FLCFRFFDMVKPPPIAYFDKRFKGGFGVMFDDIVAAFFTLLVFAIWRSF 173


  Database: BlastDatabases/707/707
    Posted date:  Apr 13, 2011 12:58 PM
  Number of letters in database: 1,221,021
  Number of sequences in database:  3697
  
Lambda     K      H
   0.329    0.141    0.509 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 3697
Number of Hits to DB: 426,025
Number of extensions: 16166
Number of successful extensions: 67
Number of sequences better than 1.0e-08: 1
Number of HSP's gapped: 67
Number of HSP's successfully gapped: 1
Length of query: 182
Length of database: 1,221,021
Length adjustment: 78
Effective length of query: 104
Effective length of database: 932,655
Effective search space: 96996120
Effective search space used: 96996120
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.8 bits)
S2: 126 (53.1 bits)