BLASTP 2.2.18 [Mar-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0001.3326.p
         (767 letters)

Database: BlastDatabases/707/707 
           3697 sequences; 1,221,021 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|152981049|ref|YP_001352301.1| malic enzyme [Janthinobacterium...  1275   0.0  

>gi|152981049|ref|YP_001352301.1| malic enzyme [Janthinobacterium
           sp. Marseille]
          Length = 770

 Score = 1275 bits (3300), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 619/764 (81%), Positives = 692/764 (90%)

Query: 4   KKEEVRQQLRQAALDYHEFPTPGKIAVTPTKLLTNQRDLSLAYSPGVAAACEEIVADPLN 63
           KKEE+R QLRQAAL+YHEFPTPGKI+VTPTK +TNQRDL+LAY+PGVA ACEEI A+P +
Sbjct: 7   KKEELRLQLRQAALEYHEFPTPGKISVTPTKQVTNQRDLALAYTPGVAVACEEIAANPAD 66

Query: 64  AFRYTARGNLVAVISNGTAVLGLGNIGALASKPVMEGKGVLFKKFAGIDVFDIEVNETDP 123
           ++RYTARGNLVAVI+NGTAVLGLGNIG  A+KPVMEGKGVLFKKFAGIDVFDIE+NETDP
Sbjct: 67  SYRYTARGNLVAVITNGTAVLGLGNIGPAAAKPVMEGKGVLFKKFAGIDVFDIEINETDP 126

Query: 124 DKLIDVIAALEPTFGGINLEDIKAPECFYIERKLREKMKIPVFHDDQHGTAIIVGAAILN 183
           DKL D+IA+LEPTFGGINLEDIKAPECFYIER LRE+MKIPVFHDDQHGTAIIV AAILN
Sbjct: 127 DKLCDIIASLEPTFGGINLEDIKAPECFYIERTLRERMKIPVFHDDQHGTAIIVAAAILN 186

Query: 184 GLKVVGKDIKNVKLVVSGAGAAALACLDLIVDLGFPIENIFVTDLAGVVYKGRKELMDPD 243
           GLKVVGKDIK  KLVVSGAGAAALACLDL+VDLGFP E+IFVTDLAGVVY+GR ELMDPD
Sbjct: 187 GLKVVGKDIKKAKLVVSGAGAAALACLDLMVDLGFPREHIFVTDLAGVVYQGRVELMDPD 246

Query: 244 KERFARETDARTLAEVIPDADIFLGLSAAGVLKPEMVKQMAARPLVLALANPTPEILPEE 303
           KE+FA++TDARTL EVI DADIFLGLSA GVLKP MV  MA RP++LALANPTPEILP+E
Sbjct: 247 KEKFAQKTDARTLGEVIADADIFLGLSAGGVLKPAMVAAMAKRPVILALANPTPEILPDE 306

Query: 304 VMAVRDDAIIATGRSDYPNQVNNVLCFPYIFRGALDSGATTITREMEIATVHAIAELAQA 363
           + AVRDDA+IATGRSD+PNQVNNVLCFPYIFRGALD GATTITREMEIA VHAIA+LAQA
Sbjct: 307 IRAVRDDAVIATGRSDFPNQVNNVLCFPYIFRGALDCGATTITREMEIAAVHAIAQLAQA 366

Query: 364 EQSDIVASTYGIANLSFGPEYIIPKPFDPRLMIKIAPAVARAAQSSGVAARPIQDMDAYI 423
           EQSDIVA+TYGI NLSFGP+YIIP PFDPRLMIKIA AVA+AA+  GVAARPI+DMDAY 
Sbjct: 367 EQSDIVATTYGIHNLSFGPDYIIPMPFDPRLMIKIAMAVAKAAEECGVAARPIKDMDAYA 426

Query: 424 EKLEQFVYHSGTFMRPIFQVAKKAAEAQKRIVYAEGEEERVLRAVQVVVDENLAKPILVG 483
           ++L+QFVY SGTFM+PIFQ+AK      KRIVYAE EEERVLRAVQVVVDE LA+PIL+G
Sbjct: 427 DRLQQFVYRSGTFMKPIFQIAKATPPELKRIVYAEAEEERVLRAVQVVVDEKLARPILIG 486

Query: 484 RPEVLEQRIQKFGLRLRAGVDFEVINPNFDSRYRDYWQTFLEMSRRKGVTEQYAKLEMRR 543
           RP VL QRI++FGLR++  VDF +INP  D RYRD+WQT+L+M+ RKGVTEQYAKLEMRR
Sbjct: 487 RPAVLAQRIERFGLRIKPDVDFTIINPEHDDRYRDFWQTYLQMTMRKGVTEQYAKLEMRR 546

Query: 544 RHTLIGSMAIHKGDADGLICGTYGTTQLHLHYIDQVLGKRAGVNVYAAMNAVILPNRQLV 603
           RHTLIG+MAIHK  ADG+ICGT+GT  LHLHY+DQVLGKRAGVNVYAAMN +IL +RQL 
Sbjct: 547 RHTLIGAMAIHKKYADGMICGTFGTNNLHLHYVDQVLGKRAGVNVYAAMNCLILSDRQLF 606

Query: 604 MVDTHVNENPNARELAEITMLAAEEMRRFGLHPRAALLSHSNFGSSNNESARKMREALAI 663
           +VDTHVNENP A ELAEIT+LAAEEMRRFGL PRAALLSHSNFGSSN+ESA+KMR+ L +
Sbjct: 607 IVDTHVNENPTAEELAEITILAAEEMRRFGLAPRAALLSHSNFGSSNSESAQKMRKTLQL 666

Query: 664 LREIAPELEVDGEMHGDTALDSKLLNAVIPDSPLKGDANLLVMPNIDAANIAYNLLKTAS 723
           +RE AP+LE+DGEMHGD AL+S  L A +PDS LKGDANLL++PNIDAANI YNLLKT  
Sbjct: 667 VRERAPDLEIDGEMHGDLALNSAQLKAAMPDSTLKGDANLLILPNIDAANITYNLLKTTV 726

Query: 724 GNGVAIGPILLGCAKPVHILTPSATVRRIINMTALCVMDAISER 767
           GNGVAIGPILLGC KPVHILTPSATVRRI+NMTALCV D+++ER
Sbjct: 727 GNGVAIGPILLGCEKPVHILTPSATVRRIVNMTALCVADSVAER 770


  Database: BlastDatabases/707/707
    Posted date:  Apr 13, 2011 12:58 PM
  Number of letters in database: 1,221,021
  Number of sequences in database:  3697
  
Lambda     K      H
   0.320    0.136    0.386 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 3697
Number of Hits to DB: 1,736,426
Number of extensions: 73869
Number of successful extensions: 219
Number of sequences better than 1.0e-08: 1
Number of HSP's gapped: 219
Number of HSP's successfully gapped: 1
Length of query: 767
Length of database: 1,221,021
Length adjustment: 91
Effective length of query: 676
Effective length of database: 884,594
Effective search space: 597985544
Effective search space used: 597985544
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 133 (55.8 bits)